Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1j06
         (637 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060312-1|AAL25351.1|  239|Drosophila melanogaster GH17623p pro...    29   4.0  
AE013599-272|AAS64795.1|  239|Drosophila melanogaster CG30159-PB...    29   4.0  
AE013599-271|AAM70842.1|  239|Drosophila melanogaster CG30159-PA...    29   4.0  
AE013599-2583|AAF57779.1|  197|Drosophila melanogaster CG14490-P...    29   7.0  

>AY060312-1|AAL25351.1|  239|Drosophila melanogaster GH17623p
           protein.
          Length = 239

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 618 YSWLERILAGFNQVFIPCQSAEG 550
           YSWL++ L G    F+P +SA+G
Sbjct: 119 YSWLQQCLIGREATFLPLKSAKG 141


>AE013599-272|AAS64795.1|  239|Drosophila melanogaster CG30159-PB,
           isoform B protein.
          Length = 239

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 618 YSWLERILAGFNQVFIPCQSAEG 550
           YSWL++ L G    F+P +SA+G
Sbjct: 119 YSWLQQCLIGREATFLPLKSAKG 141


>AE013599-271|AAM70842.1|  239|Drosophila melanogaster CG30159-PA,
           isoform A protein.
          Length = 239

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 618 YSWLERILAGFNQVFIPCQSAEG 550
           YSWL++ L G    F+P +SA+G
Sbjct: 119 YSWLQQCLIGREATFLPLKSAKG 141


>AE013599-2583|AAF57779.1|  197|Drosophila melanogaster CG14490-PA
           protein.
          Length = 197

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 634 KVGSNLFMVRTHSGRIQSGFYSLSVCR 554
           K GS +F   ++  RIQ GF+S  +CR
Sbjct: 151 KSGSGVFYHASNGQRIQHGFWSKDICR 177


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,377,741
Number of Sequences: 53049
Number of extensions: 494342
Number of successful extensions: 1358
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)