Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1j04
         (557 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p pro...   297   5e-81
AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p pro...   297   5e-81
AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal pr...   297   5e-81
AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,...   297   5e-81
AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,...   297   5e-81
BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p pro...   274   5e-74
AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p pro...    35   0.065
AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA...    35   0.065
U47849-1|AAC47196.2|  829|Drosophila melanogaster Lozenge protein.     34   0.15 
DQ397338-1|ABD59005.1|  705|Drosophila melanogaster Lozenge spli...    34   0.15 
AF217651-2|AAF35308.1|  826|Drosophila melanogaster lozenge prot...    34   0.15 
AE014298-1325|AAF46486.2|  826|Drosophila melanogaster CG1689-PA...    34   0.15 
AY070942-1|AAL48564.1|  286|Drosophila melanogaster RE03883p pro...    29   5.6  
AE013599-1623|AAF58435.2|  286|Drosophila melanogaster CG13321-P...    29   5.6  
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P...    28   7.4  
AE014298-1064|AAF46277.1|  667|Drosophila melanogaster CG15326-P...    28   7.4  

>BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p
           protein.
          Length = 256

 Score =  297 bits (730), Expect = 5e-81
 Identities = 135/154 (87%), Positives = 144/154 (93%)
 Frame = +3

Query: 3   FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 182
           FVYCG+KATL++GNVMP+  MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+T
Sbjct: 87  FVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKT 146

Query: 183 RVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNP 362
           RVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNP
Sbjct: 147 RVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNP 206

Query: 363 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 464
           VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA
Sbjct: 207 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240


>AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p
           protein.
          Length = 256

 Score =  297 bits (730), Expect = 5e-81
 Identities = 135/154 (87%), Positives = 144/154 (93%)
 Frame = +3

Query: 3   FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 182
           FVYCG+KATL++GNVMP+  MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+T
Sbjct: 87  FVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKT 146

Query: 183 RVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNP 362
           RVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNP
Sbjct: 147 RVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNP 206

Query: 363 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 464
           VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA
Sbjct: 207 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240


>AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal
           protein L8 protein.
          Length = 256

 Score =  297 bits (730), Expect = 5e-81
 Identities = 135/154 (87%), Positives = 144/154 (93%)
 Frame = +3

Query: 3   FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 182
           FVYCG+KATL++GNVMP+  MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+T
Sbjct: 87  FVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKT 146

Query: 183 RVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNP 362
           RVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNP
Sbjct: 147 RVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNP 206

Query: 363 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 464
           VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA
Sbjct: 207 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240


>AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,
           isoform B protein.
          Length = 256

 Score =  297 bits (730), Expect = 5e-81
 Identities = 135/154 (87%), Positives = 144/154 (93%)
 Frame = +3

Query: 3   FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 182
           FVYCG+KATL++GNVMP+  MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+T
Sbjct: 87  FVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKT 146

Query: 183 RVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNP 362
           RVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNP
Sbjct: 147 RVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNP 206

Query: 363 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 464
           VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA
Sbjct: 207 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240


>AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,
           isoform A protein.
          Length = 256

 Score =  297 bits (730), Expect = 5e-81
 Identities = 135/154 (87%), Positives = 144/154 (93%)
 Frame = +3

Query: 3   FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 182
           FVYCG+KATL++GNVMP+  MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+T
Sbjct: 87  FVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKT 146

Query: 183 RVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNP 362
           RVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNP
Sbjct: 147 RVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNP 206

Query: 363 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 464
           VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA
Sbjct: 207 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240


>BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p
           protein.
          Length = 579

 Score =  274 bits (672), Expect = 5e-74
 Identities = 123/143 (86%), Positives = 132/143 (92%)
 Frame = +3

Query: 3   FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 182
           FVYCG+KATL++GNVMP+  MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+T
Sbjct: 42  FVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKT 101

Query: 183 RVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNP 362
           RVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNP
Sbjct: 102 RVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNP 161

Query: 363 VEHPHGGGNHQHIGKASTVKRGT 431
           VEHPHGGGNHQHIGKASTVKR T
Sbjct: 162 VEHPHGGGNHQHIGKASTVKRRT 184


>AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p
           protein.
          Length = 294

 Score = 35.1 bits (77), Expect = 0.065
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +3

Query: 39  GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 200
           G+  P+GA+P GT +  LE+  G    L  A+G F T++      ++  V+LPS
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212


>AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA
           protein.
          Length = 294

 Score = 35.1 bits (77), Expect = 0.065
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = +3

Query: 39  GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 200
           G+  P+GA+P GT +  LE+  G    L  A+G F T++      ++  V+LPS
Sbjct: 161 GDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212


>U47849-1|AAC47196.2|  829|Drosophila melanogaster Lozenge protein.
          Length = 829

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 249 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 398
           VAG GR+ + I  +G ++H + +  +  PY      +P  HPH   +H H
Sbjct: 90  VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138


>DQ397338-1|ABD59005.1|  705|Drosophila melanogaster Lozenge splice
           variant protein.
          Length = 705

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 249 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 398
           VAG GR+ + I  +G ++H + +  +  PY      +P  HPH   +H H
Sbjct: 90  VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138


>AF217651-2|AAF35308.1|  826|Drosophila melanogaster lozenge
           protein.
          Length = 826

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 249 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 398
           VAG GR+ + I  +G ++H + +  +  PY      +P  HPH   +H H
Sbjct: 90  VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138


>AE014298-1325|AAF46486.2|  826|Drosophila melanogaster CG1689-PA
           protein.
          Length = 826

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 249 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 398
           VAG GR+ + I  +G ++H + +  +  PY      +P  HPH   +H H
Sbjct: 90  VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138


>AY070942-1|AAL48564.1|  286|Drosophila melanogaster RE03883p
           protein.
          Length = 286

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 216 LPSSNRGMV-GIVAGGGRIDKPILKAGRAYHK 308
           + SS RG+V G V GG   D   +  GRAYH+
Sbjct: 149 IASSGRGIVPGTVVGGHDADGDQIYVGRAYHE 180


>AE013599-1623|AAF58435.2|  286|Drosophila melanogaster CG13321-PA
           protein.
          Length = 286

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +3

Query: 216 LPSSNRGMV-GIVAGGGRIDKPILKAGRAYHK 308
           + SS RG+V G V GG   D   +  GRAYH+
Sbjct: 149 IASSGRGIVPGTVVGGHDADGDQIYVGRAYHE 180


>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
            protein.
          Length = 1161

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 321  RNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 440
            ++ WP +     N  E P GGG  + +G A T  RGT  G
Sbjct: 1049 QSSWPRLE--TGNTTEKPAGGGTTE-VGAAGTAGRGTGGG 1085


>AE014298-1064|AAF46277.1|  667|Drosophila melanogaster CG15326-PA
           protein.
          Length = 667

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 358 FMATPR-TYGQQLRLTLYLWYALPAFKIGLSIRPP 257
           +M+ P   YG++++ TL   + L    +G+ +RPP
Sbjct: 107 YMSMPTDAYGEEMQATLRFLWRLSVLNVGVVLRPP 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,296,005
Number of Sequences: 53049
Number of extensions: 632381
Number of successful extensions: 2225
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2224
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)