Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1j04
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 262 9e-71
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 37 0.011
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical pr... 28 5.2
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 28 5.2
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 28 5.2
U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical p... 28 5.2
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81031-6|CAF31465.2| 199|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81031-5|CAF31466.2| 196|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81031-4|CAF31468.2| 421|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81031-3|CAF31467.1| 455|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81031-2|CAF31464.1| 429|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z81031-1|CAB02718.4| 432|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF539814-1|AAN16459.1| 421|Caenorhabditis elegans tyramine rece... 27 6.9
AF539813-1|AAN16458.1| 444|Caenorhabditis elegans tyramine rece... 27 6.9
L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homo... 27 9.1
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 262 bits (643), Expect = 9e-71
Identities = 112/154 (72%), Positives = 134/154 (87%)
Frame = +3
Query: 3 FVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRT 182
F++CG KA +++GN++PVG +PEGT +CN+E K GDRG +ARASGN+ATVI HNPD K+T
Sbjct: 87 FIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNPDTKKT 146
Query: 183 RVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNP 362
R++LPSGAKKV+ S NR M+G+VAGGGR DKP+LKAGR+YHKYK KRN WP VRGVAMNP
Sbjct: 147 RIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNP 206
Query: 363 VEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 464
VEHPHGGGNHQHIG STV+R SAG+KVGLIAA
Sbjct: 207 VEHPHGGGNHQHIGHPSTVRRDASAGKKVGLIAA 240
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 36.7 bits (81), Expect = 0.011
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +3
Query: 39 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 215
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP +
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217
Query: 216 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVK 320
L + VG ++ ID I + + + ++ K
Sbjct: 218 LHRTCMATVGRLSHAD-IDGKIFGSAQMHRRFGYK 251
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 153 IGHNPDAKRTRVKLPSGAKKVL 218
IGH D +RTR LP+G KKVL
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVL 77
>Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical
protein T05F1.8 protein.
Length = 393
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -2
Query: 319 LTLYLWYALPAFKIGLSI-RPPPATIP---TMPLLLDGRTFLAP 200
LT W+ +FK+ +++ RPPP +P L + G T +AP
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPQMPESLKKKLGIPGTTEVAP 352
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 27.9 bits (59), Expect = 5.2
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = -3
Query: 312 CTCGMPFQLSK*VCQYVHLQQQYRPCLCCLMAEPSWLQTVALLLYA*HQDCVQSQWRSFQ 133
C+C Q CQ +QQQ C C A+P QTV + C QS + Q
Sbjct: 37 CSCQQVQQTQSCSCQSAPVQQQAPSCSC---AQPQQTQTVQVQSTQCAPACQQSCRQQCQ 93
Query: 132 RHVPDDLYHPFSLQDC 85
P Q C
Sbjct: 94 SAPAVSQCQPMCQQQC 109
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 27.9 bits (59), Expect = 5.2
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = -3
Query: 312 CTCGMPFQLSK*VCQYVHLQQQYRPCLCCLMAEPSWLQTVALLLYA*HQDCVQSQWRSFQ 133
C+C Q CQ +QQQ C C A+P QTV + C QS + Q
Sbjct: 37 CSCQQVQQTQSCSCQSAPVQQQAPSCSC---AQPQQTQTVQVQSTQCAPACQQSCRQQCQ 93
Query: 132 RHVPDDLYHPFSLQDC 85
P Q C
Sbjct: 94 SAPAVSQCQPMCQQQC 109
>U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical
protein C33F10.12 protein.
Length = 392
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -2
Query: 319 LTLYLWYALPAFKIGLSI-RPPPATIP---TMPLLLDGRTFLAP 200
LT W+ +FK+ +++ RPPP +P L + G T +AP
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPRMPESLKKKLGIPGTTEVAP 352
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/45 (24%), Positives = 22/45 (48%)
Frame = +3
Query: 300 YHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTS 434
Y+K++ + P++ ++ P +H G +GK+ T TS
Sbjct: 414 YNKHQNTHSSMPHIAHISSQPADHSFSGTLDARVGKSVTRDPSTS 458
>Z81031-6|CAF31465.2| 199|Caenorhabditis elegans Hypothetical
protein C02D4.2c protein.
Length = 199
Score = 27.5 bits (58), Expect = 6.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = -2
Query: 295 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 116
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 33 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 83
Query: 115 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 20
PL + + L ++ S +A P V F
Sbjct: 84 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 115
>Z81031-5|CAF31466.2| 196|Caenorhabditis elegans Hypothetical
protein C02D4.2d protein.
Length = 196
Score = 27.5 bits (58), Expect = 6.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = -2
Query: 295 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 116
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 30 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 80
Query: 115 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 20
PL + + L ++ S +A P V F
Sbjct: 81 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 112
>Z81031-4|CAF31468.2| 421|Caenorhabditis elegans Hypothetical
protein C02D4.2f protein.
Length = 421
Score = 27.5 bits (58), Expect = 6.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = -2
Query: 295 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 116
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 25 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 75
Query: 115 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 20
PL + + L ++ S +A P V F
Sbjct: 76 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 107
>Z81031-3|CAF31467.1| 455|Caenorhabditis elegans Hypothetical
protein C02D4.2e protein.
Length = 455
Score = 27.5 bits (58), Expect = 6.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = -2
Query: 295 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 116
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 36 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 86
Query: 115 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 20
PL + + L ++ S +A P V F
Sbjct: 87 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 118
>Z81031-2|CAF31464.1| 429|Caenorhabditis elegans Hypothetical
protein C02D4.2b protein.
Length = 429
Score = 27.5 bits (58), Expect = 6.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = -2
Query: 295 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 116
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 33 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 83
Query: 115 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 20
PL + + L ++ S +A P V F
Sbjct: 84 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 115
>Z81031-1|CAB02718.4| 432|Caenorhabditis elegans Hypothetical
protein C02D4.2a protein.
Length = 432
Score = 27.5 bits (58), Expect = 6.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = -2
Query: 295 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 116
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 36 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 86
Query: 115 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 20
PL + + L ++ S +A P V F
Sbjct: 87 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 118
>AF539814-1|AAN16459.1| 421|Caenorhabditis elegans tyramine
receptor short isoformSER-2a protein.
Length = 421
Score = 27.5 bits (58), Expect = 6.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = -2
Query: 295 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 116
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 25 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMAVVGNTLVVVAVF----SYR 75
Query: 115 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 20
PL + + L ++ S +A P V F
Sbjct: 76 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 107
>AF539813-1|AAN16458.1| 444|Caenorhabditis elegans tyramine
receptor long isoformSER-2 protein.
Length = 444
Score = 27.5 bits (58), Expect = 6.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = -2
Query: 295 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 116
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 25 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 75
Query: 115 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 20
PL + + L ++ S +A P V F
Sbjct: 76 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 107
>L11247-6|AAA28005.2| 367|Caenorhabditis elegans Hypothetical
protein F09G8.2 protein.
Length = 367
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 221 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHH 45
W +L+ + TL++ N SG+ TC +TS TH + ++ G L +S++ H
Sbjct: 234 WNDLISRQN---KVTLAVESWLNGSGDDIHTTCTSTSQTHDVTEMRVTG-LNFASSKDH 288
>AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homolog
F09G8.2 protein.
Length = 332
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -1
Query: 221 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHH 45
W +L+ + TL++ N SG+ TC +TS TH + ++ G L +S++ H
Sbjct: 209 WNDLISRQN---KVTLAVESWLNGSGDDIHTTCTSTSQTHDVTEMRVTG-LNFASSKDH 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,607,149
Number of Sequences: 27780
Number of extensions: 299453
Number of successful extensions: 829
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -