Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1j01
(719 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0279 + 20318440-20318688,20318785-20318931,20319449-203196... 168 4e-42
03_03_0206 + 15447054-15447181,15448243-15448298,15448373-154485... 93 2e-19
11_06_0149 - 20636801-20637044,20637859-20639180 74 1e-13
01_06_0878 - 32669790-32669846,32670206-32670299,32670384-326704... 43 2e-04
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 33 0.17
02_01_0073 - 509377-509425,510200-510270,510420-510539,510684-51... 33 0.17
03_02_0981 + 12917195-12917572,12917661-12917818,12918732-129187... 31 0.70
03_04_0249 - 19341182-19342237,19342284-19342505 31 0.92
02_05_1312 + 35642687-35642923,35643712-35643831,35644468-356445... 31 0.92
12_02_0385 + 18424617-18425594,18426811-18426850,18427581-184276... 30 2.1
10_05_0042 + 8481227-8481764,8482291-8482418,8483349-8483933,848... 29 3.7
03_01_0309 - 2432395-2433271,2433494-2434495,2434538-2435073,243... 29 4.9
05_04_0322 + 20239793-20240127,20240176-20240728,20241317-202414... 28 8.6
>01_05_0279 +
20318440-20318688,20318785-20318931,20319449-20319611,
20319770-20319887,20320607-20320676,20320774-20320854,
20320924-20320959,20321129-20321149,20321586-20321642,
20321716-20321827,20321905-20322178,20322454-20322556,
20323244-20323459,20324615-20324665,20325339-20327963
Length = 1440
Score = 168 bits (408), Expect = 4e-42
Identities = 103/268 (38%), Positives = 139/268 (51%), Gaps = 48/268 (17%)
Frame = +1
Query: 58 CNKISYNSQCKCEMKMKDFI-HYLRKSERTQ----LLYLKDWHLKNVRPTDNFYEVPKVF 222
C+ ++ Q + EM M++F+ H+ S LLYLKDWH P Y P F
Sbjct: 87 CSSREFSDQKRLEMSMREFVDHWAASSSNGDSDGSLLYLKDWHFVKEYPGYVAYTTPTFF 146
Query: 223 GLDWLNEY------------AQDNNE---DDFRFVYIGPQNSWTPLHSDVYSSYSWSVNV 357
DWLN Y A NE D+RFVY+GP+ +WTPLH+DV+ SYSWS NV
Sbjct: 147 ADDWLNMYLDSHPIHRDSDIANHTNEINCADYRFVYMGPKGTWTPLHADVFRSYSWSANV 206
Query: 358 FGRKEWTLFPPGE-----ERKLKDSLGNLPLMYNEKSFP---NIQHLKIIQESGDAIFVP 513
GRK W PP + +R L+ S+ N+ +EK FP N + L+ QE + IFVP
Sbjct: 207 CGRKLWLFLPPSQSHFVFDRNLRSSVYNINDDVSEKQFPEFNNTKWLECTQEQNEIIFVP 266
Query: 514 SGWYHQVVNL-------------------QDTISINHNWINSCNIVFMWKSLHENLLTIE 636
SGWYHQV NL +DTISINHNW N N+ ++W LHE+ +
Sbjct: 267 SGWYHQVHNLIWAANDSRPKNRILTENLKEDTISINHNWFNGYNLHWVWNLLHEDYKVAK 326
Query: 637 NEIEHLKD-TPEFHDQCQLILKSLFGID 717
+ IE ++D +F CQ L + G++
Sbjct: 327 DYIEDIRDICDDFEGLCQRNLAANTGMN 354
>03_03_0206 +
15447054-15447181,15448243-15448298,15448373-15448515,
15448630-15448827,15448901-15449100,15449585-15449684,
15449769-15450350,15450434-15450556,15451028-15451108,
15451188-15451495,15451577-15451816,15452261-15452345,
15452429-15452606,15453053-15453227,15453826-15453982
Length = 917
Score = 93.1 bits (221), Expect = 2e-19
Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 16/191 (8%)
Frame = +1
Query: 64 KISYNSQCKCEMKMKDFIHYLRKSERTQLLYLKDWHLKNVRPTD-NFYEVPKVFGLDWLN 240
+IS S K +MK+KD++ Y+ LY+ D PT Y VP +F D+
Sbjct: 140 RISQRSPQKIKMKLKDYVFYMELQHDEDPLYIFDDKFGESAPTLLEDYSVPHLFQEDFF- 198
Query: 241 EYAQDNNEDDFRFVYIGPQNSWTPLHSDVYSSYSWSVNVFGRKEWTLFPPGEER-----K 405
E + FR++ IGP+ S H D + +W+ + GRK W ++PPG
Sbjct: 199 EIMDYDQRPAFRWLIIGPERSGASWHVDPGLTSAWNTLLCGRKRWAMYPPGRVPGGVTVH 258
Query: 406 LKDSLGNLP------LMYNEKSFPNI-QH---LKIIQESGDAIFVPSGWYHQVVNLQDTI 555
+ D G++ L + +PN+ +H L+ Q G+ IFVPSGW+H V+NL TI
Sbjct: 259 VSDEDGDVDIETPTSLQWWLDIYPNLAEHEKPLECTQLPGETIFVPSGWWHCVLNLDMTI 318
Query: 556 SINHNWINSCN 588
++ N++N N
Sbjct: 319 AVTQNFVNQSN 329
>11_06_0149 - 20636801-20637044,20637859-20639180
Length = 521
Score = 74.1 bits (174), Expect = 1e-13
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 15/181 (8%)
Frame = +1
Query: 97 MKMKDFIHYLRKSERTQLLYLKDWHL-KNVRPTDNFYEVPKVFGLDWLNEYAQDNNEDDF 273
M + ++ Y + + LYL D + V YEVP F D ++ D
Sbjct: 268 MTLDRYLQYADNVQEERPLYLFDAKFTEKVPEMGRDYEVPAYFREDLFGVLGEER--PDH 325
Query: 274 RFVYIGPQNSWTPLHSDVYSSYSWSVNVFGRKEWTLFPP-----GEERKLKDSLGNLPLM 438
R+V IGP S + H D S+ +W+ + G K+W +FPP G + P+
Sbjct: 326 RWVIIGPAGSGSSFHVDPNSTSAWNAVIKGAKKWVMFPPEVVPPGVHPSADGAEVTSPVS 385
Query: 439 YNEKSFPNI---------QHLKIIQESGDAIFVPSGWYHQVVNLQDTISINHNWINSCNI 591
E F N + ++ I +G+ +FVP+GW+H V+NL+++I+I N+++ N+
Sbjct: 386 IMEW-FMNFYGACKTWEKRPVECICRAGEVVFVPNGWWHLVINLEESIAITQNYVSRRNL 444
Query: 592 V 594
+
Sbjct: 445 L 445
>01_06_0878 -
32669790-32669846,32670206-32670299,32670384-32670499,
32670786-32671096,32672243-32672364,32672754-32672870,
32672982-32673054,32673416-32673542,32673659-32673727,
32673811-32674170,32674493-32674633
Length = 528
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +1
Query: 475 KIIQESGDAIFVPSGWYHQVVNLQDTISINHNW 573
++I GDA+F+P GWYHQV + TI+IN W
Sbjct: 281 RVILNCGDALFIPEGWYHQVDSDDLTIAINFWW 313
>09_03_0218 +
13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +1
Query: 463 IQHLKIIQESGDAIFVPSGWYHQVVNLQDTISINHNWINSCNI 591
I+ +Q+ G+A+F+P+G HQV NL+ I ++++ N+
Sbjct: 814 IEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKIALDFVSPENV 856
>02_01_0073 - 509377-509425,510200-510270,510420-510539,510684-510769,
510843-510915,510996-511718,513752-514081,514124-514210,
514494-515250,515336-515399,515477-515609,515702-515801,
515952-516088,516195-516341,516428-516478,517083-517148
Length = 997
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +1
Query: 484 QESGDAIFVPSGWYHQVVNLQDTISINHNWINSCNI 591
Q+ G+A+F+P+G HQV NL+ I + ++++ N+
Sbjct: 898 QKLGEAVFIPAGCPHQVRNLKSCIKVALDFVSPENV 933
>03_02_0981 +
12917195-12917572,12917661-12917818,12918732-12918765,
12918942-12919074,12919167-12919221,12919281-12920064,
12920440-12920769,12920788-12920895,12921259-12921678,
12921775-12921847,12922291-12922376,12922873-12922992,
12923086-12923156,12923350-12923449
Length = 949
Score = 31.5 bits (68), Expect = 0.70
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 484 QESGDAIFVPSGWYHQVVNLQDTISI 561
Q G+A+FVP+G QV NLQ T+ +
Sbjct: 833 QHIGEAVFVPAGCPFQVKNLQSTVQL 858
>03_04_0249 - 19341182-19342237,19342284-19342505
Length = 425
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 166 WHLKNVRPT-DNFYEVPKVFGLDWLNEYAQDNNEDDFRFVYI 288
W N P ++ +++ K+ G+DW+ QD NED R Y+
Sbjct: 112 WRDINETPEFESLHDLFKIVGIDWIVTLKQDYNEDLIRQFYV 153
>02_05_1312 +
35642687-35642923,35643712-35643831,35644468-35644534,
35644673-35644694,35645053-35645152,35645282-35645414,
35645483-35645517,35645708-35646409,35646789-35647121,
35647337-35647601,35647665-35647999,35648105-35648177,
35648271-35648356,35648479-35648598,35648674-35648741,
35648825-35648882
Length = 917
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 484 QESGDAIFVPSGWYHQVVNLQDTISINHNWINSCNI 591
Q+ G+A+ +P+G HQV NL+ I + ++++ N+
Sbjct: 816 QKLGEAVLIPAGCPHQVRNLKSCIKVALDFVSPENV 851
>12_02_0385 +
18424617-18425594,18426811-18426850,18427581-18427636,
18428032-18428151
Length = 397
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 373 WTLFPPGEERKLKDSLGNLPLMYNEKSFP--NIQHLKIIQES 492
W LF P + ++ + N+ + +K +P +++ L+++QES
Sbjct: 306 WKLFKPVKYESTEEDVNNMKMQLQDKKYPFFSLKGLRVLQES 347
>10_05_0042 +
8481227-8481764,8482291-8482418,8483349-8483933,
8484033-8484061,8485221-8485612,8486038-8486454,
8486587-8486668,8487116-8487686
Length = 913
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Frame = +1
Query: 496 DAIFVPSGWYHQVVN--LQDTISINHNW-INSCNI------VFMWKSLHENLLTIENEIE 648
DA V G++++++N + +I ++HN + +C + + + KS ENL TI N+ +
Sbjct: 631 DAYCVARGYFNELINRSMIQSILLDHNDDVLTCRLHDMILDLIISKSTDENLFTIVNDSK 690
Query: 649 HLKDTPEFHDQCQLILKS 702
++ +F LIL++
Sbjct: 691 FMRRLCDFRSLQVLILEN 708
>03_01_0309 -
2432395-2433271,2433494-2434495,2434538-2435073,
2435579-2435716,2436050-2436148,2436278-2436346,
2436968-2437063
Length = 938
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 517 LMEQIWHHHFLGLFLNAECWEMTFHYTLRVNSPNYLL 407
L+E ++H HFL L + E W HY + YL+
Sbjct: 495 LLENLFHPHFLCLEILTELWCFFMHYA-EAETSTYLI 530
>05_04_0322 +
20239793-20240127,20240176-20240728,20241317-20241425,
20244456-20244723,20244943-20245197,20245594-20246539
Length = 821
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +1
Query: 253 DNNEDDFRFVYIGPQNSWTPLHSDVYSSYSWSVNVFGRKEWTLFPPGEERKLKDS 417
DNNE+ + V + N L DV S +V V R +W LF + KL S
Sbjct: 457 DNNEEAYFMVTVKNDNILFRLTIDVSSQAKSTVWVADRNQWMLFFLQPKEKLAAS 511
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,456,691
Number of Sequences: 37544
Number of extensions: 391340
Number of successful extensions: 944
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -