Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1i23
(602 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT009811-1|AAP88813.1| 243|Homo sapiens VAMP (vesicle-associate... 150 4e-36
BC001712-1|AAH01712.1| 243|Homo sapiens VAPB protein protein. 150 4e-36
AY358464-1|AAQ88829.1| 243|Homo sapiens VAPB protein. 150 4e-36
AL035455-3|CAC15021.1| 243|Homo sapiens VAMP (vesicle-associate... 150 4e-36
AF086628-1|AAD13577.1| 243|Homo sapiens VAMP-associated protein... 150 4e-36
BT019618-1|AAV38424.1| 242|Homo sapiens VAMP (vesicle-associate... 149 1e-35
BC002992-1|AAH02992.2| 249|Homo sapiens VAMP (vesicle-associate... 149 1e-35
AF154847-1|AAF72105.1| 242|Homo sapiens 33 kDa Vamp-associated ... 149 1e-35
AF086627-1|AAD13576.1| 242|Homo sapiens VAMP-associated protein... 149 1e-35
AF057358-1|AAC26508.1| 242|Homo sapiens VAMP-associated protein... 149 1e-35
AF044670-1|AAD09742.1| 242|Homo sapiens 33 kDa Vamp-associated ... 149 1e-35
AF160212-1|AAF67013.1| 243|Homo sapiens VAMP-associated 33 kDa ... 144 2e-34
AL035455-2|CAM27023.1| 99|Homo sapiens VAMP (vesicle-associate... 81 4e-15
AF086629-1|AAD13578.1| 99|Homo sapiens VAMP-associated protein... 81 4e-15
AB209665-1|BAD92902.1| 84|Homo sapiens VAMP-associated protein... 65 2e-10
BC030641-1|AAH30641.1| 518|Homo sapiens motile sperm domain con... 62 1e-09
AL834345-1|CAD39011.1| 243|Homo sapiens hypothetical protein pr... 62 1e-09
AK093075-1|BAC04043.1| 455|Homo sapiens protein ( Homo sapiens ... 62 1e-09
AK127252-1|BAC86901.1| 147|Homo sapiens n B and C (VAPB). prot... 39 0.012
BC011653-1|AAH11653.1| 235|Homo sapiens motile sperm domain con... 36 0.14
BC005042-1|AAH05042.1| 235|Homo sapiens motile sperm domain con... 36 0.14
AF053356-8|AAC78798.1| 235|Homo sapiens ORF3splicevariant_b pro... 36 0.14
AF053356-7|AAC78799.1| 221|Homo sapiens ORF3splicevariant_a pro... 36 0.14
BC111057-1|AAI11058.2| 239|Homo sapiens EGLN3 protein protein. 31 4.1
BC105939-1|AAI05940.1| 239|Homo sapiens egl nine homolog 3 (C. ... 31 4.1
BC064924-1|AAH64924.2| 239|Homo sapiens egl nine homolog 3 (C. ... 31 4.1
BC010992-1|AAH10992.3| 239|Homo sapiens egl nine homolog 3 (C. ... 31 4.1
AK128681-1|BAC87568.1| 867|Homo sapiens protein ( Homo sapiens ... 31 4.1
AK025273-1|BAB15101.1| 239|Homo sapiens protein ( Homo sapiens ... 31 4.1
AK024365-1|BAB14899.1| 1148|Homo sapiens protein ( Homo sapiens ... 31 4.1
AJ310545-1|CAC42511.1| 239|Homo sapiens EGLN3 protein protein. 31 4.1
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 4.1
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 31 4.1
BC053877-1|AAH53877.1| 605|Homo sapiens solute carrier family 4... 30 7.2
BC033858-1|AAH33858.2| 677|Homo sapiens SLC44A3 protein protein. 30 7.2
AY358659-1|AAQ89022.1| 445|Homo sapiens SGRD558 protein. 30 7.2
BC015003-1|AAH15003.2| 506|Homo sapiens phospholipase D family,... 29 9.5
AY358843-1|AAQ89202.1| 489|Homo sapiens PPRR2488 protein. 29 9.5
>BT009811-1|AAP88813.1| 243|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein B and C protein.
Length = 243
Score = 150 bits (363), Expect = 4e-36
Identities = 66/121 (54%), Positives = 88/121 (72%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNS 286
QVL++EPQ+ELKF+G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 287 KQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFET 466
+++ QP DPNE KHKFMVQS+ AP ++++ VWKE PE LMD KL+CVFE
Sbjct: 66 SINVSVMLQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDSKLRCVFEL 125
Query: 467 P 469
P
Sbjct: 126 P 126
>BC001712-1|AAH01712.1| 243|Homo sapiens VAPB protein protein.
Length = 243
Score = 150 bits (363), Expect = 4e-36
Identities = 66/121 (54%), Positives = 88/121 (72%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNS 286
QVL++EPQ+ELKF+G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 287 KQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFET 466
+++ QP DPNE KHKFMVQS+ AP ++++ VWKE PE LMD KL+CVFE
Sbjct: 66 SINVSVMLQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDSKLRCVFEL 125
Query: 467 P 469
P
Sbjct: 126 P 126
>AY358464-1|AAQ88829.1| 243|Homo sapiens VAPB protein.
Length = 243
Score = 150 bits (363), Expect = 4e-36
Identities = 66/121 (54%), Positives = 88/121 (72%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNS 286
QVL++EPQ+ELKF+G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 287 KQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFET 466
+++ QP DPNE KHKFMVQS+ AP ++++ VWKE PE LMD KL+CVFE
Sbjct: 66 SINVSVMLQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDSKLRCVFEL 125
Query: 467 P 469
P
Sbjct: 126 P 126
>AL035455-3|CAC15021.1| 243|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein B and C protein.
Length = 243
Score = 150 bits (363), Expect = 4e-36
Identities = 66/121 (54%), Positives = 88/121 (72%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNS 286
QVL++EPQ+ELKF+G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 287 KQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFET 466
+++ QP DPNE KHKFMVQS+ AP ++++ VWKE PE LMD KL+CVFE
Sbjct: 66 SINVSVMLQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDSKLRCVFEL 125
Query: 467 P 469
P
Sbjct: 126 P 126
>AF086628-1|AAD13577.1| 243|Homo sapiens VAMP-associated protein B
protein.
Length = 243
Score = 150 bits (363), Expect = 4e-36
Identities = 66/121 (54%), Positives = 88/121 (72%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNS 286
QVL++EPQ+ELKF+G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 287 KQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFET 466
+++ QP DPNE KHKFMVQS+ AP ++++ VWKE PE LMD KL+CVFE
Sbjct: 66 SINVSVMLQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDSKLRCVFEL 125
Query: 467 P 469
P
Sbjct: 126 P 126
>BT019618-1|AAV38424.1| 242|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein A, 33kDa protein.
Length = 242
Score = 149 bits (360), Expect = 1e-35
Identities = 65/129 (50%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNS 286
Q+L ++P +LKFKG F TT ++L NP++ V FK+KTTAP++YCVRPNSG++ P S
Sbjct: 6 QILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGS 65
Query: 287 KQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFET 466
+++ QP DPNE KHKFMVQ++ AP ++++ VWKE P++LMD KL+CVFE
Sbjct: 66 TVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEM 125
Query: 467 P-RGTNLND 490
P LND
Sbjct: 126 PNENDKLND 134
>BC002992-1|AAH02992.2| 249|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein A, 33kDa protein.
Length = 249
Score = 149 bits (360), Expect = 1e-35
Identities = 65/129 (50%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNS 286
Q+L ++P +LKFKG F TT ++L NP++ V FK+KTTAP++YCVRPNSG++ P S
Sbjct: 13 QILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGS 72
Query: 287 KQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFET 466
+++ QP DPNE KHKFMVQ++ AP ++++ VWKE P++LMD KL+CVFE
Sbjct: 73 TVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEM 132
Query: 467 P-RGTNLND 490
P LND
Sbjct: 133 PNENDKLND 141
>AF154847-1|AAF72105.1| 242|Homo sapiens 33 kDa Vamp-associated
protein protein.
Length = 242
Score = 149 bits (360), Expect = 1e-35
Identities = 65/129 (50%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNS 286
Q+L ++P +LKFKG F TT ++L NP++ V FK+KTTAP++YCVRPNSG++ P S
Sbjct: 6 QILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGS 65
Query: 287 KQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFET 466
+++ QP DPNE KHKFMVQ++ AP ++++ VWKE P++LMD KL+CVFE
Sbjct: 66 TVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEM 125
Query: 467 P-RGTNLND 490
P LND
Sbjct: 126 PNENDKLND 134
>AF086627-1|AAD13576.1| 242|Homo sapiens VAMP-associated protein A
protein.
Length = 242
Score = 149 bits (360), Expect = 1e-35
Identities = 65/129 (50%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNS 286
Q+L ++P +LKFKG F TT ++L NP++ V FK+KTTAP++YCVRPNSG++ P S
Sbjct: 6 QILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGS 65
Query: 287 KQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFET 466
+++ QP DPNE KHKFMVQ++ AP ++++ VWKE P++LMD KL+CVFE
Sbjct: 66 TVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEM 125
Query: 467 P-RGTNLND 490
P LND
Sbjct: 126 PNENDKLND 134
>AF057358-1|AAC26508.1| 242|Homo sapiens VAMP-associated protein of
33 kDa protein.
Length = 242
Score = 149 bits (360), Expect = 1e-35
Identities = 65/129 (50%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNS 286
Q+L ++P +LKFKG F TT ++L NP++ V FK+KTTAP++YCVRPNSG++ P S
Sbjct: 6 QILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGS 65
Query: 287 KQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFET 466
+++ QP DPNE KHKFMVQ++ AP ++++ VWKE P++LMD KL+CVFE
Sbjct: 66 TVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEM 125
Query: 467 P-RGTNLND 490
P LND
Sbjct: 126 PNENDKLND 134
>AF044670-1|AAD09742.1| 242|Homo sapiens 33 kDa Vamp-associated
protein protein.
Length = 242
Score = 149 bits (360), Expect = 1e-35
Identities = 65/129 (50%), Positives = 90/129 (69%), Gaps = 1/129 (0%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNS 286
Q+L ++P +LKFKG F TT ++L NP++ V FK+KTTAP++YCVRPNSG++ P S
Sbjct: 6 QILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGS 65
Query: 287 KQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFET 466
+++ QP DPNE KHKFMVQ++ AP ++++ VWKE P++LMD KL+CVFE
Sbjct: 66 TVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEM 125
Query: 467 P-RGTNLND 490
P LND
Sbjct: 126 PNENDKLND 134
>AF160212-1|AAF67013.1| 243|Homo sapiens VAMP-associated 33 kDa
protein protein.
Length = 243
Score = 144 bits (350), Expect = 2e-34
Identities = 66/121 (54%), Positives = 86/121 (71%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNS 286
QVL++EPQ+ELKF+G F TT ++L NPT+ V FK+KTTAP++YCVRPNSGV+ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGA 65
Query: 287 KQEIAITPQPVYLDPNENHKHKFMVQSVIAPEGKTNIDQVWKEISPEQLMDYKLKCVFET 466
+++ QP DPNE KHKFMVQS+ AP +++D KE PE LMD KL+CVFE
Sbjct: 66 SLNVSVMLQPFDYDPNEKSKHKFMVQSMFAPPDTSDMDGTRKEAKPEDLMDSKLRCVFEL 125
Query: 467 P 469
P
Sbjct: 126 P 126
>AL035455-2|CAM27023.1| 99|Homo sapiens VAMP (vesicle-associated
membrane protein)-associated protein B and C protein.
Length = 99
Score = 80.6 bits (190), Expect = 4e-15
Identities = 34/56 (60%), Positives = 46/56 (82%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 274
QVL++EPQ+ELKF+G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 61
>AF086629-1|AAD13578.1| 99|Homo sapiens VAMP-associated protein C
protein.
Length = 99
Score = 80.6 bits (190), Expect = 4e-15
Identities = 34/56 (60%), Positives = 46/56 (82%)
Frame = +2
Query: 107 QVLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 274
QVL++EPQ+ELKF+G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 61
>AB209665-1|BAD92902.1| 84|Homo sapiens VAMP-associated protein
B/C variant protein.
Length = 84
Score = 64.9 bits (151), Expect = 2e-10
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = +2
Query: 137 LKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVL 274
LKF+G F TT ++L NPT+ V FK+KTTAP++YCVRPNSG++
Sbjct: 1 LKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGII 46
>BC030641-1|AAH30641.1| 518|Homo sapiens motile sperm domain
containing 2 protein.
Length = 518
Score = 62.5 bits (145), Expect = 1e-09
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +2
Query: 110 VLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSK 289
+L I P EL F T + LTN T + V FK++TTAP+KY V+P++ P +
Sbjct: 327 LLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGAS 386
Query: 290 QEIAITPQPVYLDPNENHKHKFMVQSV--IAPEGKTNIDQVWKEISPEQLMDYKLKC 454
+I ++P L + + M + + G + Q WKE+ ++M+++L+C
Sbjct: 387 VDIVVSPHG-GLTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRLRC 442
>AL834345-1|CAD39011.1| 243|Homo sapiens hypothetical protein
protein.
Length = 243
Score = 62.5 bits (145), Expect = 1e-09
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +2
Query: 110 VLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSK 289
+L I P EL F T + LTN T + V FK++TTAP+KY V+P++ P +
Sbjct: 52 LLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGAS 111
Query: 290 QEIAITPQPVYLDPNENHKHKFMVQSV--IAPEGKTNIDQVWKEISPEQLMDYKLKC 454
+I ++P L + + M + + G + Q WKE+ ++M+++L+C
Sbjct: 112 VDIVVSPHG-GLTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRLRC 167
>AK093075-1|BAC04043.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ35756 fis, clone TESTI2004687. ).
Length = 455
Score = 62.5 bits (145), Expect = 1e-09
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +2
Query: 110 VLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSK 289
+L I P EL F T + LTN T + V FK++TTAP+KY V+P++ P +
Sbjct: 264 LLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGAS 323
Query: 290 QEIAITPQPVYLDPNENHKHKFMVQSV--IAPEGKTNIDQVWKEISPEQLMDYKLKC 454
+I ++P L + + M + + G + Q WKE+ ++M+++L+C
Sbjct: 324 VDIVVSPHG-GLTVSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRLRC 379
>AK127252-1|BAC86901.1| 147|Homo sapiens n B and C (VAPB).
protein.
Length = 147
Score = 39.1 bits (87), Expect = 0.012
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +2
Query: 404 VWKEISPEQLMDYKLKCVFETP 469
+WKE PE LMD KL+CVFE P
Sbjct: 9 LWKEAKPEDLMDSKLRCVFELP 30
>BC011653-1|AAH11653.1| 235|Homo sapiens motile sperm domain
containing 3 protein.
Length = 235
Score = 35.5 bits (78), Expect = 0.14
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +2
Query: 110 VLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSK 289
VL P +L F+ G + L NPT + F++ TAP KY V G + P S
Sbjct: 34 VLVFPP--DLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSC 91
Query: 290 QEIAI---TPQPVYLDPNENHK 346
+I I P P + D + +
Sbjct: 92 IDIVIRHVAPIPSHYDVQDRFR 113
>BC005042-1|AAH05042.1| 235|Homo sapiens motile sperm domain
containing 3 protein.
Length = 235
Score = 35.5 bits (78), Expect = 0.14
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +2
Query: 110 VLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSK 289
VL P +L F+ G + L NPT + F++ TAP KY V G + P S
Sbjct: 34 VLVFPP--DLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSC 91
Query: 290 QEIAI---TPQPVYLDPNENHK 346
+I I P P + D + +
Sbjct: 92 IDIVIRHVAPIPSHYDVQDRFR 113
>AF053356-8|AAC78798.1| 235|Homo sapiens ORF3splicevariant_b
protein.
Length = 235
Score = 35.5 bits (78), Expect = 0.14
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +2
Query: 110 VLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSK 289
VL P +L F+ G + L NPT + F++ TAP KY V G + P S
Sbjct: 34 VLVFPP--DLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSC 91
Query: 290 QEIAI---TPQPVYLDPNENHK 346
+I I P P + D + +
Sbjct: 92 IDIVIRHVAPIPSHYDVQDRFR 113
>AF053356-7|AAC78799.1| 221|Homo sapiens ORF3splicevariant_a
protein.
Length = 221
Score = 35.5 bits (78), Expect = 0.14
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Frame = +2
Query: 110 VLTIEPQNELKFKGLFEHGCTTYMRLTNPTNDTVLFKIKTTAPKKYCVRPNSGVLAPNSK 289
VL P +L F+ G + L NPT + F++ TAP KY V G + P S
Sbjct: 20 VLVFPP--DLVFRADQRSGPRQLLTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSC 77
Query: 290 QEIAI---TPQPVYLDPNENHK 346
+I I P P + D + +
Sbjct: 78 IDIVIRHVAPIPSHYDVQDRFR 99
>BC111057-1|AAI11058.2| 239|Homo sapiens EGLN3 protein protein.
Length = 239
Score = 30.7 bits (66), Expect = 4.1
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -2
Query: 547 FCDCNSFLGDIVLGCIIARIVKISATRSFKD 455
FC ++FLG++V C++ R+ ++ T + +D
Sbjct: 28 FCYLDNFLGEVVGDCVLERVKQLHCTGALRD 58
>BC105939-1|AAI05940.1| 239|Homo sapiens egl nine homolog 3 (C.
elegans) protein.
Length = 239
Score = 30.7 bits (66), Expect = 4.1
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -2
Query: 547 FCDCNSFLGDIVLGCIIARIVKISATRSFKD 455
FC ++FLG++V C++ R+ ++ T + +D
Sbjct: 28 FCYLDNFLGEVVGDCVLERVKQLHCTGALRD 58
>BC064924-1|AAH64924.2| 239|Homo sapiens egl nine homolog 3 (C.
elegans) protein.
Length = 239
Score = 30.7 bits (66), Expect = 4.1
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -2
Query: 547 FCDCNSFLGDIVLGCIIARIVKISATRSFKD 455
FC ++FLG++V C++ R+ ++ T + +D
Sbjct: 28 FCYLDNFLGEVVGDCVLERVKQLHCTGALRD 58
>BC010992-1|AAH10992.3| 239|Homo sapiens egl nine homolog 3 (C.
elegans) protein.
Length = 239
Score = 30.7 bits (66), Expect = 4.1
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -2
Query: 547 FCDCNSFLGDIVLGCIIARIVKISATRSFKD 455
FC ++FLG++V C++ R+ ++ T + +D
Sbjct: 28 FCYLDNFLGEVVGDCVLERVKQLHCTGALRD 58
>AK128681-1|BAC87568.1| 867|Homo sapiens protein ( Homo sapiens
cDNA FLJ46845 fis, clone UTERU3001946, highly similar
to Homo sapiens mucin 16 (MUC16). ).
Length = 867
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3
Query: 336 SLGSKYTGCGVIAISCFEFGART 268
SLG++YTGC VIA+ + GA T
Sbjct: 785 SLGARYTGCRVIALRSVKNGAET 807
>AK025273-1|BAB15101.1| 239|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21620 fis, clone COL07838. ).
Length = 239
Score = 30.7 bits (66), Expect = 4.1
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -2
Query: 547 FCDCNSFLGDIVLGCIIARIVKISATRSFKD 455
FC ++FLG++V C++ R+ ++ T + +D
Sbjct: 28 FCYLDNFLGEVVGDCVLERVKQLHCTGALRD 58
>AK024365-1|BAB14899.1| 1148|Homo sapiens protein ( Homo sapiens
cDNA FLJ14303 fis, clone PLACE2000132. ).
Length = 1148
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3
Query: 336 SLGSKYTGCGVIAISCFEFGART 268
SLG++YTGC VIA+ + GA T
Sbjct: 609 SLGARYTGCRVIALRSVKNGAET 631
>AJ310545-1|CAC42511.1| 239|Homo sapiens EGLN3 protein protein.
Length = 239
Score = 30.7 bits (66), Expect = 4.1
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -2
Query: 547 FCDCNSFLGDIVLGCIIARIVKISATRSFKD 455
FC ++FLG++V C++ R+ ++ T + +D
Sbjct: 28 FCYLDNFLGEVVGDCVLERVKQLHCTGALRD 58
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3
Query: 336 SLGSKYTGCGVIAISCFEFGART 268
SLG++YTGC VIA+ + GA T
Sbjct: 21613 SLGARYTGCRVIALRSVKNGAET 21635
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3
Query: 336 SLGSKYTGCGVIAISCFEFGART 268
SLG++YTGC VIA+ + GA T
Sbjct: 6456 SLGARYTGCRVIALRSVKNGAET 6478
>BC053877-1|AAH53877.1| 605|Homo sapiens solute carrier family 44,
member 3 protein.
Length = 605
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 520 DIVLG-CIIARIVKISATRSFKDTL*LVVHELLGAYLLPHLINVGFSFWSYY 368
D +LG CI+A + ++ +F+ L+VH + +L L G +W YY
Sbjct: 165 DTILGLCILALALSLAMMFTFRFITTLLVHIFISLVILGLLFVCGVLWWLYY 216
>BC033858-1|AAH33858.2| 677|Homo sapiens SLC44A3 protein protein.
Length = 677
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 520 DIVLG-CIIARIVKISATRSFKDTL*LVVHELLGAYLLPHLINVGFSFWSYY 368
D +LG CI+A + ++ +F+ L+VH + +L L G +W YY
Sbjct: 237 DTILGLCILALALSLAMMFTFRFITTLLVHIFISLVILGLLFVCGVLWWLYY 288
>AY358659-1|AAQ89022.1| 445|Homo sapiens SGRD558 protein.
Length = 445
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 520 DIVLG-CIIARIVKISATRSFKDTL*LVVHELLGAYLLPHLINVGFSFWSYY 368
D +LG CI+A + ++ +F+ L+VH + +L L G +W YY
Sbjct: 5 DTILGLCILALALSLAMMFTFRFITTLLVHIFISLVILGLLFVCGVLWWLYY 56
>BC015003-1|AAH15003.2| 506|Homo sapiens phospholipase D family,
member 4 protein.
Length = 506
Score = 29.5 bits (63), Expect = 9.5
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -1
Query: 437 P*VARGLSPSTLDQCWFFLLELLHFGP*IYACGFHW---GPNIQVAE*LRFLVSNLAQEL 267
P A S L Q W LL+ ++ ++W GP+I V + L L Q+L
Sbjct: 107 PSAAGSPSAQPLGQAWLQLLDTAQES--VHVASYYWSLTGPDIGVNDSSSQLGEALLQKL 164
Query: 266 QNWDARNISLVL 231
Q RNISL +
Sbjct: 165 QQLLGRNISLAV 176
>AY358843-1|AAQ89202.1| 489|Homo sapiens PPRR2488 protein.
Length = 489
Score = 29.5 bits (63), Expect = 9.5
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -1
Query: 437 P*VARGLSPSTLDQCWFFLLELLHFGP*IYACGFHW---GPNIQVAE*LRFLVSNLAQEL 267
P A S L Q W LL+ ++ ++W GP+I V + L L Q+L
Sbjct: 90 PSAAGSPSAQPLGQAWLQLLDTAQES--VHVASYYWSLTGPDIGVNDSSSQLGEALLQKL 147
Query: 266 QNWDARNISLVL 231
Q RNISL +
Sbjct: 148 QQLLGRNISLAV 159
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,489,292
Number of Sequences: 237096
Number of extensions: 1893420
Number of successful extensions: 3444
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 3387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3441
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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