Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1i18
         (683 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86971-1|BAA13207.2|  751|Homo sapiens KIAA0217 protein.               31   5.0  
BC131630-1|AAI31631.1|  738|Homo sapiens La ribonucleoprotein do...    31   5.0  
AL359878-4|CAI13663.2|  738|Homo sapiens La ribonucleoprotein do...    31   5.0  
AL157709-4|CAI39596.2|  738|Homo sapiens La ribonucleoprotein do...    31   5.0  

>D86971-1|BAA13207.2|  751|Homo sapiens KIAA0217 protein.
          Length = 751

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 25/100 (25%), Positives = 43/100 (43%)
 Frame = +2

Query: 383 PKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLT 562
           P+ ++ T++YL+  L+ P     + +  T SPA     +P+ S    P +S     ++L 
Sbjct: 374 PQTWSATHSYLDPPLVTPFPNTGFINGFT-SPAFKPAASPLTSLRQYPPRSRNPSKSHLR 432

Query: 563 QNIPSVNNPAKIGMGPEIINMVMGSSGNKPKIQESHIAGQ 682
             IPS      +   P I N       N  +  ++  AGQ
Sbjct: 433 HAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQ 472


>BC131630-1|AAI31631.1|  738|Homo sapiens La ribonucleoprotein
           domain family, member 5 protein.
          Length = 738

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 25/100 (25%), Positives = 43/100 (43%)
 Frame = +2

Query: 383 PKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLT 562
           P+ ++ T++YL+  L+ P     + +  T SPA     +P+ S    P +S     ++L 
Sbjct: 361 PQTWSATHSYLDPPLVTPFPNTGFINGFT-SPAFKPAASPLTSLRQYPPRSRNPSKSHLR 419

Query: 563 QNIPSVNNPAKIGMGPEIINMVMGSSGNKPKIQESHIAGQ 682
             IPS      +   P I N       N  +  ++  AGQ
Sbjct: 420 HAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQ 459


>AL359878-4|CAI13663.2|  738|Homo sapiens La ribonucleoprotein
           domain family, member 5 protein.
          Length = 738

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 25/100 (25%), Positives = 43/100 (43%)
 Frame = +2

Query: 383 PKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLT 562
           P+ ++ T++YL+  L+ P     + +  T SPA     +P+ S    P +S     ++L 
Sbjct: 361 PQTWSATHSYLDPPLVTPFPNTGFINGFT-SPAFKPAASPLTSLRQYPPRSRNPSKSHLR 419

Query: 563 QNIPSVNNPAKIGMGPEIINMVMGSSGNKPKIQESHIAGQ 682
             IPS      +   P I N       N  +  ++  AGQ
Sbjct: 420 HAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQ 459


>AL157709-4|CAI39596.2|  738|Homo sapiens La ribonucleoprotein
           domain family, member 5 protein.
          Length = 738

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 25/100 (25%), Positives = 43/100 (43%)
 Frame = +2

Query: 383 PKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPLQSGQTPLNNLT 562
           P+ ++ T++YL+  L+ P     + +  T SPA     +P+ S    P +S     ++L 
Sbjct: 361 PQTWSATHSYLDPPLVTPFPNTGFINGFT-SPAFKPAASPLTSLRQYPPRSRNPSKSHLR 419

Query: 563 QNIPSVNNPAKIGMGPEIINMVMGSSGNKPKIQESHIAGQ 682
             IPS      +   P I N       N  +  ++  AGQ
Sbjct: 420 HAIPSAERGPGLLESPSIFNFTADRLINGVRSPQTRQAGQ 459


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,066,645
Number of Sequences: 237096
Number of extensions: 1781221
Number of successful extensions: 2711
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2711
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)