Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1i16
(773 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0221 - 27653591-27653724,27654270-27654473,27655216-276553... 51 9e-07
01_06_0763 + 31800556-31800618,31800659-31800802,31800859-318009... 50 2e-06
01_06_0280 + 28129750-28129868,28130677-28131145,28133605-281338... 42 5e-04
06_01_0209 + 1587656-1587876,1587964-1588055,1590520-1590545,159... 40 0.002
11_06_0634 - 25685216-25685329,25685407-25685511,25685681-256857... 40 0.002
03_02_0971 - 12807981-12808094,12808949-12809053,12809236-128092... 39 0.004
01_01_0268 - 2214923-2215048,2215131-2215286,2215371-2215469,221... 39 0.005
08_02_0657 - 19749835-19751942,19753123-19753561 38 0.007
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 38 0.007
01_01_0270 - 2225250-2225263,2225549-2225732,2225817-2225972,222... 36 0.036
01_01_0886 - 6970112-6970225,6970357-6970473,6970567-6970635,697... 34 0.11
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 33 0.19
08_02_1554 + 27841801-27842007,27842282-27842455,27842554-278426... 32 0.44
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 32 0.44
05_04_0102 + 18013994-18014049,18014236-18014335,18014499-180147... 31 0.77
04_04_0394 + 24905501-24905673,24907824-24907868,24908412-249085... 31 0.77
01_01_0939 - 7404209-7404490,7405057-7405368,7405470-7405609,740... 30 1.8
01_05_0749 + 24890944-24891146,24891414-24891535,24891633-248917... 30 2.3
02_04_0376 - 22474473-22476947 29 5.4
04_04_1052 - 30427508-30428083,30429526-30429783 28 7.2
11_04_0441 + 17781533-17781775,17782007-17782114,17782386-177824... 28 9.5
09_02_0253 - 6319198-6319240,6319364-6319552,6319650-6319995,632... 28 9.5
06_01_0860 - 6514921-6515034,6515125-6515196,6515344-6515400,651... 28 9.5
>01_06_0221 -
27653591-27653724,27654270-27654473,27655216-27655315,
27655728-27655888,27656846-27656930,27657548-27657614,
27658434-27658541,27658639-27658704,27659341-27659387,
27659497-27659691,27659833-27659877
Length = 403
Score = 51.2 bits (117), Expect = 9e-07
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +1
Query: 583 RKSLAGFLTSAAPEKKQLAELLYQNIIRSS-GVTWDDIRGLNSAKSLLMESVIYPVRYP 756
+KSL SA E + LAE L ++IIR S V W+ I+GL +AK LL E+V+ P++YP
Sbjct: 97 QKSLLPSFESA--EMRNLAETLLRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYP 153
>01_06_0763 +
31800556-31800618,31800659-31800802,31800859-31800980,
31801742-31801807,31801891-31801998,31802226-31802292,
31802716-31802800,31803169-31803329,31803490-31803591,
31803807-31804029,31804155-31804300
Length = 428
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +1
Query: 622 EKKQLAELLYQNIIRSS-GVTWDDIRGLNSAKSLLMESVIYPVRYP 756
E + LAE L ++IIR S V W+ I+GL +AK LL E+V+ P++YP
Sbjct: 122 EMRNLAETLLRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYP 167
>01_06_0280 +
28129750-28129868,28130677-28131145,28133605-28133802,
28134168-28134412,28134749-28134907,28135491-28135578,
28135983-28136264
Length = 519
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +1
Query: 634 LAELLYQNIIRSS-GVTWDDIRGLNSAKSLLMESVIYPVRYPD 759
LA +L ++++ S+ GV WDD+ GL+ AK LL E+V+ P+ P+
Sbjct: 217 LAAMLERDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPE 259
>06_01_0209 +
1587656-1587876,1587964-1588055,1590520-1590545,
1591130-1591370,1591459-1591554,1591639-1591754,
1591837-1591917,1592597-1592720,1593222-1593271,
1593735-1593825,1594386-1594421,1594502-1594602,
1594684-1594800
Length = 463
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +1
Query: 631 QLAELLYQNII-RSSGVTWDDIRGLNSAKSLLMESVIYPVRYPDV 762
+L E++ I+ RS V W+D+ GL+ AK LME VI P + D+
Sbjct: 172 KLVEMINTTIVDRSPAVKWEDVAGLDKAKQALMEMVILPTKRRDL 216
>11_06_0634 - 25685216-25685329,25685407-25685511,25685681-25685740,
25685827-25685965,25686056-25686240,25686328-25686411,
25686499-25686621,25687088-25687267,25687364-25687433,
25687520-25687616,25687695-25687770,25688259-25688348,
25688383-25688529,25688647-25688715,25689004-25689177,
25689266-25689336,25689409-25689557,25690723-25690774,
25690865-25691120,25691196-25691287,25691420-25691541,
25691909-25692679,25692883-25692940,25693068-25693107,
25694462-25694595,25694685-25694793,25694896-25694991
Length = 1220
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Frame = +1
Query: 532 SLLKDFSEIQN--TSTALDRKSLAGFLTSAAPEKKQLAELLYQNIIRSSGVTWDDIRGLN 705
SL + +QN + +KSL +T EK+ LA+++ N I GVT+DDI L
Sbjct: 868 SLKHGLNMLQNMQSDNKSSKKSLKDVVTENEFEKRLLADVIPPNDI---GVTFDDIGALE 924
Query: 706 SAKSLLMESVIYPVRYPDV 762
+ K L E V+ P++ P++
Sbjct: 925 NVKDTLKELVMLPLQRPEL 943
>03_02_0971 -
12807981-12808094,12808949-12809053,12809236-12809295,
12809399-12809537,12809648-12809832,12809926-12810009,
12810093-12810215,12810617-12810796,12811017-12811092,
12811178-12811277,12811355-12811430,12812155-12812244,
12812342-12812449,12813583-12813651,12813751-12813921,
12814002-12814072,12814263-12814360,12814659-12814719,
12814935-12814971,12815217-12815308,12815428-12815549,
12816281-12816414
Length = 764
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = +1
Query: 562 NTSTALDRKSLAGFLTSAAPEKKQLAELLYQNIIRSSGVTWDDIRGLNSAKSLLMESVIY 741
N ++ RKSL T EK+ LA+++ + I GVT++DI L S K L E V+
Sbjct: 424 NPKSSNIRKSLKDIATENEFEKRLLADVIPPDEI---GVTFEDIGALESVKETLKELVML 480
Query: 742 PVRYPDVXYR 771
P++ P++ R
Sbjct: 481 PLQRPELFSR 490
>01_01_0268 -
2214923-2215048,2215131-2215286,2215371-2215469,
2215557-2215631,2215732-2215800,2216515-2216713,
2220162-2220267,2221117-2221588
Length = 433
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 658 IIRSSGVTWDDIRGLNSAKSLLMESVIYPVRYP 756
I + W+D+ GL SAK L E+VI PV++P
Sbjct: 121 ITEKPNIKWNDVAGLESAKQALQEAVILPVKFP 153
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +1
Query: 616 APEKKQLAELLYQNIIRSSGVTWDDIRGLNSAKSLLMESVIYPVRYPDV 762
A E + + L I+ V+WDDI GL K L E+V YPV +P++
Sbjct: 466 AMEVTKPSALRETGIVEVPKVSWDDIGGLGEVKRELQETVQYPVEHPEM 514
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 646 LYQNIIRSSGVTWDDIRGLNSAKSLLMESVIYPVRYPD 759
L + ++ V+W+DI GL + K L E+V YPV +P+
Sbjct: 470 LRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 507
>01_01_0270 -
2225250-2225263,2225549-2225732,2225817-2225972,
2226276-2226374,2226489-2226563,2226682-2226750,
2226917-2227115,2227492-2227597,2228118-2228526
Length = 436
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 676 VTWDDIRGLNSAKSLLMESVIYPVRYP 756
V W D+ GL SAK L E+ I P+++P
Sbjct: 106 VKWSDVAGLESAKEALQEAAILPIKFP 132
>01_01_0886 -
6970112-6970225,6970357-6970473,6970567-6970635,
6970711-6970849,6970964-6971532,6971799-6971966,
6972097-6972184,6972260-6972818,6972924-6973024,
6973113-6973155,6973845-6973938,6974160-6974215,
6974460-6974581,6975306-6975517
Length = 816
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 622 EKKQLAELLYQNIIRSSGVTWDDIRGLNSAKSLLMESVIYPVRYPDV 762
EK+ E++ N I GVT+DDI L+ K L E V+ P+R PD+
Sbjct: 490 EKRIRPEVIPANEI---GVTFDDIGALSDIKESLQELVMLPLRRPDL 533
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 583 RKSLAGFLTSAAPEKKQLAELLYQNIIRSSGVTWDDIRGLNSAKSLLMESVIYPVRYPDV 762
+KSL T EK+ L +++ + I GVT++DI L + K L E V+ P++ P++
Sbjct: 686 KKSLKDVTTENEFEKRLLGDVIPPDEI---GVTFEDIGALENVKETLKELVMLPLQRPEL 742
>08_02_1554 +
27841801-27842007,27842282-27842455,27842554-27842653,
27843273-27843725,27843936-27844469,27844500-27844580,
27844690-27844781,27844890-27844963,27845071-27845293,
27845429-27845522,27845607-27845761,27845899-27846129,
27846803-27847003,27847257-27847382,27847497-27847558,
27847775-27847892,27848040-27848324,27848475-27848513
Length = 1082
Score = 32.3 bits (70), Expect = 0.44
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +1
Query: 682 WDDIRGLNSAKSLLMESVIYPVRYPDV 762
W+D+ GLN A +++ E++ P +YP++
Sbjct: 791 WEDVGGLNEAVTIIKETLELPSKYPNI 817
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 673 GVTWDDIRGLNSAKSLLMESVIYPVRYPDV 762
GVT+DDI L K L E V+ P+R PD+
Sbjct: 497 GVTFDDIGALADIKESLQELVMLPLRRPDL 526
>05_04_0102 +
18013994-18014049,18014236-18014335,18014499-18014783,
18014854-18015023,18015382-18015510,18016109-18016205,
18016318-18016395,18016474-18016635,18016673-18016771
Length = 391
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 676 VTWDDIRGLNSAKSLLMESVIYPVRY 753
V+WDDI GL + K L ++V +P+++
Sbjct: 135 VSWDDIGGLKAVKKKLQQAVEWPIKH 160
>04_04_0394 +
24905501-24905673,24907824-24907868,24908412-24908513,
24908700-24908799,24908963-24909247,24909318-24909487,
24909846-24909974,24910332-24910428,24910541-24910618,
24910694-24911017
Length = 500
Score = 31.5 bits (68), Expect = 0.77
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 676 VTWDDIRGLNSAKSLLMESVIYPVRY 753
V+WDDI GL + K L ++V +P+++
Sbjct: 223 VSWDDIGGLKAVKKKLQQAVEWPIKH 248
>01_01_0939 -
7404209-7404490,7405057-7405368,7405470-7405609,
7406226-7406289,7406378-7406616,7406957-7406983,
7407590-7407749
Length = 407
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = -1
Query: 659 IFWYRSS---ANCFFSGAALVKKPANDFLSRAVDVFCISEKSFSK 534
+FW +S +CF SGA VK+ L++ +++FC+ +K K
Sbjct: 9 VFWLSNSDDGVSCF-SGAFRVKRVLRMVLNKVLELFCVKKKDSKK 52
>01_05_0749 +
24890944-24891146,24891414-24891535,24891633-24891721,
24891813-24891848,24892268-24892367,24892524-24892566,
24892645-24892739,24892978-24893036,24893114-24893613,
24893691-24893772,24893864-24894429,24894520-24894655,
24894750-24894812,24894942-24895172,24895282-24895395
Length = 812
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 673 GVTWDDIRGLNSAKSLLMESVIYPVRYPD 759
GVT+DDI L K L E V+ P++ PD
Sbjct: 465 GVTFDDIGALADIKECLHELVMLPLQRPD 493
>02_04_0376 - 22474473-22476947
Length = 824
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +1
Query: 475 VLDVVEKNDLDLPSTFTVTSLLKDFSEIQNTSTALDRKSL 594
+ DV++KN+ LP++ T +S+L+ FSE T A SL
Sbjct: 657 LFDVMKKNEF-LPNSGTYSSILEGFSEDGRTEEATSLVSL 695
>04_04_1052 - 30427508-30428083,30429526-30429783
Length = 277
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 421 EEKPVRPQTRRVKPERSQVLDVVEKNDLDLPSTFTVTSLLKDF 549
+EKP+R + R++ +R Q + EK+ + S + LL+DF
Sbjct: 157 DEKPIRSRKRKIADKRQQSQRMAEKSRTSISS---IHELLQDF 196
>11_04_0441 +
17781533-17781775,17782007-17782114,17782386-17782471,
17782546-17782807,17782921-17783120,17783770-17784012,
17784118-17784394,17784625-17784759,17784880-17784960,
17785311-17785406,17785661-17785756,17785834-17785890,
17785967-17786035,17786154-17786240,17786534-17786635,
17786730-17786819,17786900-17786980,17787573-17787653,
17787761-17787856,17787937-17787993,17788093-17788137,
17788218-17788346
Length = 906
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 154 SSSRINYIKAPLKDDTIVSQLFD 86
SSS+ N++K L DDT+ SQ D
Sbjct: 711 SSSKDNFVKIMLDDDTLHSQFID 733
>09_02_0253 -
6319198-6319240,6319364-6319552,6319650-6319995,
6320811-6320893,6320977-6321074,6321384-6321461,
6321891-6322000,6322083-6322180,6323199-6323296,
6323403-6323463,6323688-6323831,6324103-6324206,
6324634-6324787,6324860-6324879,6324967-6325029,
6326521-6326632,6326711-6326796,6326872-6326899,
6327242-6327293,6329034-6329250
Length = 727
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 538 LKDFSEIQNTSTALDRKSLAGFLTSAAPEKKQLAEL 645
LK+F + + TALDR L F TS E + E+
Sbjct: 502 LKEFHKSTTSFTALDRNYLTPFFTSQTDEDDDVFEI 537
>06_01_0860 -
6514921-6515034,6515125-6515196,6515344-6515400,
6515512-6515650,6515737-6515921,6516043-6516126,
6516552-6516674,6518043-6518219,6518331-6518400,
6518478-6518574,6519022-6519097,6519240-6519329,
6519548-6519655,6520715-6520756,6520854-6521045,
6521239-6521309,6521396-6521550,6521999-6522064,
6522769-6522820,6523476-6523566,6523897-6524094,
6524173-6524267,6524361-6524485,6524586-6525016
Length = 969
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 673 GVTWDDIRGLNSAKSLLMESVIYPVRYPDV 762
GV +DDI L K L E V P+R P++
Sbjct: 675 GVKFDDIGALEDVKKTLDELVTLPMRRPEL 704
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,908,927
Number of Sequences: 37544
Number of extensions: 362043
Number of successful extensions: 912
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -