Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1i16
         (773 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53149-2|AAM29664.1|  451|Caenorhabditis elegans Hypothetical pr...    38   0.008
AC024756-9|AAK29883.4|  430|Caenorhabditis elegans Related to ye...    38   0.008
Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical pr...    37   0.014
Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical pr...    37   0.014
Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical p...    37   0.014
Z92827-9|CAB54200.1|  510|Caenorhabditis elegans Hypothetical pr...    35   0.056
Z92827-8|CAB07330.1|  527|Caenorhabditis elegans Hypothetical pr...    35   0.056
Z54269-6|CAB54208.1|  510|Caenorhabditis elegans Hypothetical pr...    35   0.056
Z54269-5|CAA91023.1|  527|Caenorhabditis elegans Hypothetical pr...    35   0.056
AF016427-1|AAB65351.1|  594|Caenorhabditis elegans Hypothetical ...    33   0.30 
Z75712-1|CAB00040.1|  724|Caenorhabditis elegans Hypothetical pr...    31   0.91 
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z54236-6|CAA90981.3|  465|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AL117203-4|CAB55106.2|  813|Caenorhabditis elegans Hypothetical ...    29   4.9  
AF059715-1|AAF05624.1|  813|Caenorhabditis elegans cell survival...    29   4.9  
U41992-5|AAA83356.1|  549|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>U53149-2|AAM29664.1|  451|Caenorhabditis elegans Hypothetical
           protein C24B5.2a protein.
          Length = 451

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = +1

Query: 628 KQLAELLYQNIIRSSGVTWDDIRGLNSAKSLLMESVIYPVRYPDV 762
           K + E L   ++ ++GV  DD+ G +SAK+ L E+VI P   P++
Sbjct: 159 KVIGERLLDEVLDNTGVRMDDVAGCHSAKAALEEAVILPALNPNL 203


>AC024756-9|AAK29883.4|  430|Caenorhabditis elegans Related to yeast
           vacuolar proteinsorting factor protein 4 protein.
          Length = 430

 Score = 37.9 bits (84), Expect = 0.008
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 622 EKKQLAELLYQNIIRSS-GVTWDDIRGLNSAKSLLMESVIYPVRYPDV 762
           +KK+  + L   I+     V W DI GL  AK  L E+VI P+++P +
Sbjct: 96  DKKKFQDKLSGAIVMEKPNVKWTDIAGLEGAKEALKEAVILPIKFPQL 143


>Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical
           protein C06A1.1 protein.
          Length = 809

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 628 KQLAELLYQNIIRSSGVTWDDIRGLNSAKSLLMESVIYPVRYPD 759
           K     L + ++ +   TW DI GL + K  L E V YPV +P+
Sbjct: 464 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPE 507


>Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 628 KQLAELLYQNIIRSSGVTWDDIRGLNSAKSLLMESVIYPVRYPD 759
           K     L + ++ +   TW DI GL + K  L E V YPV +P+
Sbjct: 463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPE 506


>Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 628 KQLAELLYQNIIRSSGVTWDDIRGLNSAKSLLMESVIYPVRYPD 759
           K     L + ++ +   TW DI GL + K  L E V YPV +P+
Sbjct: 463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPE 506


>Z92827-9|CAB54200.1|  510|Caenorhabditis elegans Hypothetical
           protein F02C12.5c protein.
          Length = 510

 Score = 35.1 bits (77), Expect = 0.056
 Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 571 TALDRKSLAGFLTSAAPEKKQLAELLYQNIIRSSGVTWDDIRGLNSAKSLLMESV-IYPV 747
           T  +  + A +L +  PEK +LA+     ++ S  V++DD+  L    +++ ES+ +YPV
Sbjct: 324 TTANSLAYASYLLAKHPEKMKLAQEEVDTVVGSENVSYDDMTKLKYLDAVVRESLRLYPV 383

Query: 748 RY 753
            +
Sbjct: 384 AW 385


>Z92827-8|CAB07330.1|  527|Caenorhabditis elegans Hypothetical
           protein F02C12.5a protein.
          Length = 527

 Score = 35.1 bits (77), Expect = 0.056
 Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 571 TALDRKSLAGFLTSAAPEKKQLAELLYQNIIRSSGVTWDDIRGLNSAKSLLMESV-IYPV 747
           T  +  + A +L +  PEK +LA+     ++ S  V++DD+  L    +++ ES+ +YPV
Sbjct: 324 TTANSLAYASYLLAKHPEKMKLAQEEVDTVVGSENVSYDDMTKLKYLDAVVRESLRLYPV 383

Query: 748 RY 753
            +
Sbjct: 384 AW 385


>Z54269-6|CAB54208.1|  510|Caenorhabditis elegans Hypothetical
           protein F02C12.5c protein.
          Length = 510

 Score = 35.1 bits (77), Expect = 0.056
 Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 571 TALDRKSLAGFLTSAAPEKKQLAELLYQNIIRSSGVTWDDIRGLNSAKSLLMESV-IYPV 747
           T  +  + A +L +  PEK +LA+     ++ S  V++DD+  L    +++ ES+ +YPV
Sbjct: 324 TTANSLAYASYLLAKHPEKMKLAQEEVDTVVGSENVSYDDMTKLKYLDAVVRESLRLYPV 383

Query: 748 RY 753
            +
Sbjct: 384 AW 385


>Z54269-5|CAA91023.1|  527|Caenorhabditis elegans Hypothetical
           protein F02C12.5a protein.
          Length = 527

 Score = 35.1 bits (77), Expect = 0.056
 Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 571 TALDRKSLAGFLTSAAPEKKQLAELLYQNIIRSSGVTWDDIRGLNSAKSLLMESV-IYPV 747
           T  +  + A +L +  PEK +LA+     ++ S  V++DD+  L    +++ ES+ +YPV
Sbjct: 324 TTANSLAYASYLLAKHPEKMKLAQEEVDTVVGSENVSYDDMTKLKYLDAVVRESLRLYPV 383

Query: 748 RY 753
            +
Sbjct: 384 AW 385


>AF016427-1|AAB65351.1|  594|Caenorhabditis elegans Hypothetical
           protein F32D1.1 protein.
          Length = 594

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 676 VTWDDIRGLNSAKSLLMESVIYPVRYPDV 762
           + W D+ GL  AK  L E V+ P + PDV
Sbjct: 313 IGWADVAGLEGAKKALREIVVLPFKRPDV 341


>Z75712-1|CAB00040.1|  724|Caenorhabditis elegans Hypothetical
           protein K04G2.3 protein.
          Length = 724

 Score = 31.1 bits (67), Expect = 0.91
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +1

Query: 652 QNIIRSSGVTWDDIRGLNSAKSLLMESVIYPVRYPDVXYR 771
           Q I+    V+W+DI G    K  + ++VI+P ++P+   R
Sbjct: 448 QFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFER 487


>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
           protein C25A8.4 protein.
          Length = 1067

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/65 (21%), Positives = 32/65 (49%)
 Frame = +1

Query: 322 EVCDNIDLDIILQDYCSYYLIRFNKQPQFCRKVEEKPVRPQTRRVKPERSQVLDVVEKND 501
           EV +   +D +  DYCS+ ++ +       + +EE       +++   RS++++V  +  
Sbjct: 382 EVEETFPIDNLKSDYCSHIVVPYFALDLSDKMIEEDKAEDLVKKIDDWRSKIVEVAPRLI 441

Query: 502 LDLPS 516
           L + S
Sbjct: 442 LSVGS 446


>Z54236-6|CAA90981.3|  465|Caenorhabditis elegans Hypothetical
           protein C27B7.6 protein.
          Length = 465

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +1

Query: 388 FNKQPQFCRKVEEKPVRPQTRRVKPERSQVLDVVEK 495
           F  + QFC+K  E PV+      + E   VLD++ K
Sbjct: 368 FAHETQFCKKDNETPVKKPYSSNQDEDHSVLDMIRK 403


>AL117203-4|CAB55106.2|  813|Caenorhabditis elegans Hypothetical
           protein Y48C3A.7 protein.
          Length = 813

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 676 VTWDDIRGLNSAKSLLMESVIYPVRYPD 759
           V+WDDI  L   +  L  S++YP++  D
Sbjct: 530 VSWDDIGALVEVRKQLEWSILYPIKRAD 557


>AF059715-1|AAF05624.1|  813|Caenorhabditis elegans cell survival
           CED-4-interactingprotein MAC-1 protein.
          Length = 813

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 676 VTWDDIRGLNSAKSLLMESVIYPVRYPD 759
           V+WDDI  L   +  L  S++YP++  D
Sbjct: 530 VSWDDIGALVEVRKQLEWSILYPIKRAD 557


>U41992-5|AAA83356.1|  549|Caenorhabditis elegans Hypothetical
           protein F32E10.5 protein.
          Length = 549

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/65 (27%), Positives = 27/65 (41%)
 Frame = +1

Query: 208 FRARKRILKYMVLGYLKQEGYLLTAETFNTEANLTGEYEVCDNIDLDIILQDYCSYYLIR 387
           ++ R+ I KY    +   EG  +     N    L  EY   +NI +D+     C YY I 
Sbjct: 25  YQIRQYIEKYPQFLWKYSEGVTIPGYVLNIAEQLNSEYGNVENIPIDLY---PCEYYRIV 81

Query: 388 FNKQP 402
            +  P
Sbjct: 82  EHSMP 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,621,560
Number of Sequences: 27780
Number of extensions: 329589
Number of successful extensions: 1015
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)