Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1i14
(685 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 59 5e-10
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 40 4e-04
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 38 0.002
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 37 0.002
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 35 0.013
SPBC1861.08c |||U2 snRNP-associated protein Lea1 |Schizosaccharo... 34 0.017
SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit ... 28 1.1
SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit |Sch... 28 1.4
SPAC806.04c |||DUF89 family protein|Schizosaccharomyces pombe|ch... 27 1.9
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 27 3.3
SPCC1259.09c |||pyruvate dehydrogenase protein x component|Schiz... 26 4.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 4.4
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 26 5.8
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 59.3 bits (137), Expect = 5e-10
Identities = 29/85 (34%), Positives = 47/85 (55%)
Frame = +2
Query: 221 LSTLVSCEKLSLSSNMIDKIAGIAGMRNLKILSLGRNYIKSLSGVETVADSLEELWISYN 400
L TLV+ EKL + N I K ++ L +LS+ N I + ++ L EL++S+N
Sbjct: 166 LDTLVNLEKLWVGKNKITKFENFEKLQKLSLLSIQSNRITQFENLACLSHCLRELYVSHN 225
Query: 401 PIDKLKGIGALKNLRVLYMANNAVK 475
+ GI L+NL +L ++NN +K
Sbjct: 226 GLTSFSGIEVLENLEILDVSNNMIK 250
Score = 54.4 bits (125), Expect = 1e-08
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Frame = +2
Query: 248 LSLSSNMIDKIAGIAGMRN-LKILSLGRNYIKSLSGVETVADSLEELWISYNPIDKLKGI 424
LS+ SN I + +A + + L+ L + N + S SG+E V ++LE L +S N I L +
Sbjct: 197 LSIQSNRITQFENLACLSHCLRELYVSHNGLTSFSGIE-VLENLEILDVSNNMIKHLSYL 255
Query: 425 GALKNLRVLYMANNAVKEWVEF-NRLQECPALRDLVFTGNPICENQPDIDTWRAQAANRL 601
LKNL L+ +NN + + E + L L + F GNP+ + P + +R + L
Sbjct: 256 AGLKNLVELWASNNELSSFQEIEDELSGLKKLETVYFEGNPLQKTNPAV--YRNKVRLCL 313
Query: 602 QQIIKLD 622
Q+ ++D
Sbjct: 314 PQLRQID 320
Score = 41.1 bits (92), Expect = 1e-04
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Frame = +2
Query: 233 VSCEKLSLSSNMIDKIAGIAGMRNLKILSLGRNYIKSLSGVETVADSLEELWISYNPIDK 412
V C +L S G+ +NL+ L L +N IK +E+V ++L EL + N I +
Sbjct: 40 VDCVELIQSRIQSMASLGLERFKNLQSLCLRQNQIKK---IESVPETLTELDLYDNLIVR 96
Query: 413 LKGIGALKNLRVLYMANNAVKEWVEFNRLQECPALRDLVFTGNPI--CENQPDID--TWR 580
++ + +KNL L ++ N +K N L+ L +L F N I EN +D T
Sbjct: 97 IENLDNVKNLTYLDLSFNNIKTIRNINHLK---GLENLFFVQNRIRRIENLEGLDRLTNL 153
Query: 581 AQAANRLQQIIKLD 622
N+++ I LD
Sbjct: 154 ELGGNKIRVIENLD 167
Score = 38.3 bits (85), Expect = 0.001
Identities = 25/92 (27%), Positives = 46/92 (50%)
Frame = +2
Query: 200 IEKMDGALSTLVSCEKLSLSSNMIDKIAGIAGMRNLKILSLGRNYIKSLSGVETVADSLE 379
I+K++ TL +L L N+I +I + ++NL L L N IK++ + + LE
Sbjct: 74 IKKIESVPETLT---ELDLYDNLIVRIENLDNVKNLTYLDLSFNNIKTIRNINHL-KGLE 129
Query: 380 ELWISYNPIDKLKGIGALKNLRVLYMANNAVK 475
L+ N I +++ + L L L + N ++
Sbjct: 130 NLFFVQNRIRRIENLEGLDRLTNLELGGNKIR 161
Score = 35.5 bits (78), Expect = 0.007
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +2
Query: 221 LSTLVSCEKLSLSSNMIDKIAGIAGMRNLKILSLGRNYIKSLSGVETVADSLEELWISY- 397
+ L + E L +S+NMI ++ +AG++NL L N + S +E L++L Y
Sbjct: 233 IEVLENLEILDVSNNMIKHLSYLAGLKNLVELWASNNELSSFQEIEDELSGLKKLETVYF 292
Query: 398 --NPIDK 412
NP+ K
Sbjct: 293 EGNPLQK 299
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 39.5 bits (88), Expect = 4e-04
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +2
Query: 233 VSCEKLSLSSNMIDKIAGIAGMRNLKILSLGRNYIKSLSGVETVADSLEELWISYNPIDK 412
V+ L+ N + + + + NL+ L + N ++ L+G+ ++ L EL + N +
Sbjct: 646 VTIRDLNAVENRLSSLTSFSNLLNLQYLDISYNQLEDLTGLSSLIH-LRELKVDSNHLWS 704
Query: 413 LKGIGALKNLRVLYMANNAVKE 478
L GI L L L NN +KE
Sbjct: 705 LDGIQHLDGLLKLSACNNRIKE 726
Score = 37.9 bits (84), Expect = 0.001
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 22/152 (14%)
Frame = +2
Query: 179 LQFQWPPIEKMDGALSTLVSCEKLSLSSNMIDKIAGIAGMRNLKILSLGRNYIKSLSGVE 358
L + +E + G LS+L+ +L + SN + + GI + L LS N IK LS
Sbjct: 673 LDISYNQLEDLTG-LSSLIHLRELKVDSNHLWSLDGIQHLDGLLKLSACNNRIKELSFTN 731
Query: 359 TVADSLEELWISYNPIDKLKGIGALKNL----------------------RVLYMANNAV 472
+ LEEL + N I++++ I +L+NL R+L ++NNA+
Sbjct: 732 SNLHRLEELLLGNNEIEEIEEISSLQNLMVLQLDNNKLTNLKASQPMIHLRILRISNNAI 791
Query: 473 KEWVEFNRLQECPALRDLVFTGNPICENQPDI 568
+ + + P LR L N PDI
Sbjct: 792 HQL----EVDQFPHLRTLYMDLNRF-NRPPDI 818
Score = 30.7 bits (66), Expect = 0.20
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 5/158 (3%)
Frame = +2
Query: 167 KVIELQFQWPPIEKMDGALSTLVSCEKLSLSSNMIDKIAGIAGMRNLKILSLGRNYIKSL 346
+++ F+ E + + + L LS+N + ++ L L +K +
Sbjct: 823 RLVNFSFRTQDPEASNFVIQPSLDIRNLYLSNNTFVTLDCKHMFLGVRYLELANVQLKEV 882
Query: 347 SG-VETVADSLEELWISYNPIDKLKGIGALKNLRVLYMANNAVKEWVEF-NRLQECPALR 520
+ T +L L +S+N I ++ + L+ + LY+ N +K+ + L L
Sbjct: 883 PKYIATSMPNLRVLDLSHNYISDIESLKPLQMIHRLYLVGNRIKKMRNLCDILANLKQLN 942
Query: 521 DLVFTGNPICEN-QPDID--TWRAQAANRLQQIIKLDG 625
L NP+ N P ID + AA++ QQ I G
Sbjct: 943 VLDLRMNPLNFNIYPVIDDSIYELSAASKYQQSINQKG 980
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 37.5 bits (83), Expect = 0.002
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Frame = +2
Query: 170 VIELQFQWPPIEKMDGALSTLVSCEKLSLSSNMIDKIAGI--AGMRNLKILSLGRNYIKS 343
++ L + ++ AL L L+L+SN I + +L+IL L RN++ S
Sbjct: 358 LVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRTFYHISLSHLQILVLSRNHLTS 417
Query: 344 LSGVETVADSLEELWISYNPID---KLKGIGALKNLRVLYMANNAVKEWVE------FNR 496
LSG+E V SLE+L I N I + + + N Y++ N + FN
Sbjct: 418 LSGLENV-PSLEKLDIRDNSITDVVEFRRLVGNTNFEEAYLSLNPFTKTYSSYRITIFNY 476
Query: 497 LQECPALRDLVFTG 538
+E P +D++ G
Sbjct: 477 FREYPGSKDIMLDG 490
Score = 32.7 bits (71), Expect = 0.051
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +2
Query: 227 TLVSCEKLSLSSNMIDKIAGIAG-MRNLKILSLGRNYIKSLSGVETVADS-LEELWISYN 400
+L S L LS N + +I G + L L+L N I ++ S L+ L +S N
Sbjct: 354 SLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRTFYHISLSHLQILVLSRN 413
Query: 401 PIDKLKGIGALKNLRVLYMANNAVKEWVEFNRL 499
+ L G+ + +L L + +N++ + VEF RL
Sbjct: 414 HLTSLSGLENVPSLEKLDIRDNSITDVVEFRRL 446
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 37.1 bits (82), Expect = 0.002
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 2/159 (1%)
Frame = +2
Query: 98 KPTTCKEAIARWEKQKGESAADAKVIELQFQWPPIEKMDGALSTLVSCEKLSLSSNMIDK 277
K + + I E E+A + L + P E+++ + +L+L N I
Sbjct: 10 KNSEIERIIKEAEDAGPENALTLDLSHLNLRELPYEQLERIQGRIA---RLALGHNFIKS 66
Query: 278 IAG-IAGMRNLKILSLGRNYIKSLSGVETVADSLEELWISYNPIDKL-KGIGALKNLRVL 451
I I L+ L++ N ++ +SLE L IS N I +L + GAL NL+VL
Sbjct: 67 IGPEILKFTRLRYLNIRSNVLREFPESLCRLESLEILDISRNKIKQLPESFGALMNLKVL 126
Query: 452 YMANNAVKEWVEFNRLQECPALRDLVFTGNPICENQPDI 568
++ N + E + + P L L N I P I
Sbjct: 127 SISKNRLFELPTY--IAHMPNLEILKIENNHIVFPPPHI 163
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 34.7 bits (76), Expect = 0.013
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = +2
Query: 230 LVSCEKLSLS-SNMIDKIAGIAGMRNLKILSLGRNYIKSLSGVETVADSLEELWISYNPI 406
LV+ L LS +N + I + L+ L+ N + +S L+ L++ +N +
Sbjct: 524 LVNLTYLDLSYNNFVTFPLIITELSQLETLNFSHNLLSQISSKIGSLVKLKHLYLQFNDL 583
Query: 407 DKL--KGIGALKNLRVLYMANNAVKEWVEFNRLQECPALRDL 526
+ IG LKNL + ++ NA+ L ECP L +
Sbjct: 584 SNRLPQEIGLLKNLETIDLSYNAI---TNIASLSECPKLNSI 622
Score = 33.1 bits (72), Expect = 0.038
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
Frame = +2
Query: 236 SCEKLSLSSNMIDKIA-GIAGMRNL-------KIL-SLGRNYIKSLSGVETVADSLEELW 388
S + ++LSSN+++KI +A + L KI+ +L N + SLS E V ++EEL+
Sbjct: 753 SLKVVNLSSNILEKIKLPVATSKKLTRTISQLKIMRTLSGNPVSSLSSQEFVMPTVEELY 812
Query: 389 ISYNPI--DKLKGIGALKNLRVLYMANNAVKEWVEFNRLQECPALRDLVFTGNPI 547
+ N + D + K L+VL ++ N + E + Q L+ L +GN +
Sbjct: 813 LVDNRLGNDCFTALEYFKCLKVLNLSYNYLTE-IPSKFFQNFSDLKHLFVSGNEL 866
>SPBC1861.08c |||U2 snRNP-associated protein Lea1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 239
Score = 34.3 bits (75), Expect = 0.017
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 431 LKNLRVLYMANNAVKEWVEFNRLQECPALRDLVFTGNPICENQ 559
L NL+ L +A N ++E + + L CP L +L NP+ + Q
Sbjct: 86 LPNLKTLSLAQNHLQEIADLDPLASCPQLTNLSCIDNPVAQKQ 128
Score = 25.4 bits (53), Expect = 7.7
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +2
Query: 242 EKLSLSSNMIDKIAGIAG--MRNLKILSLGRNYIKSLSGVETVAD--SLEELWISYNPI 406
+ L +N I IA G + NLK LSL +N+++ ++ ++ +A L L NP+
Sbjct: 66 QTLLCGNNRITAIAPDIGKVLPNLKTLSLAQNHLQEIADLDPLASCPQLTNLSCIDNPV 124
>SPBC3B8.11 |rrn6||RNA polymerase I transcription factor subunit
Rrn6 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 868
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 200 IEKMDGALSTLVSCEKLSLSSNMIDKIAG 286
I+K DG+LS + CEK SL ++++ G
Sbjct: 520 IDKADGSLSLHILCEKSSLKIYNLEELTG 548
>SPCC584.01c |||sulfite reductase NADPH flavoprotein subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -3
Query: 443 GDSLVLQYLSACRWDCS*SIALQGYLPQFPRLTMTLCSFFQETIS 309
GDSLVL +SA R D S S+A + P F LT+ F +S
Sbjct: 377 GDSLVLSLVSAYRTDKSRSVA---FRPLFDNLTLAGVRFTVAQVS 418
>SPAC806.04c |||DUF89 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 440
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 266 YWTISLIFRNSLEWKARHPFSQ 201
Y ISLIF EWKA PF Q
Sbjct: 117 YRRISLIFARYSEWKAYDPFFQ 138
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 422 IGALKNLRVLYMANNAVKEWVEFNRLQECPALRDLVFTGNPICE 553
+G ++ +++L AN + NRL + P +R ++FT N C+
Sbjct: 258 MGHIEMIKLLLRANADIGVC---NRLSQTPLMRSVIFTNNYDCQ 298
>SPCC1259.09c |||pyruvate dehydrogenase protein x
component|Schizosaccharomyces pombe|chr 3|||Manual
Length = 456
Score = 26.2 bits (55), Expect = 4.4
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Frame = +2
Query: 80 FRTMALKPTTCKEAIARWEKQKGESAADAKV---IELQFQWPPIEKMDGALSTLVSCEKL 250
FR AL PT + I +W ++G+S + +E +E D + V EK
Sbjct: 38 FRMPALSPTMEEGNITKWHFKEGDSFKSGDILLEVETDKATMDVEVQDNGILAKVLIEKG 97
Query: 251 SLSSNMIDKIAGIAGMR-NLKILSLGRNYIKSLSGVETVADSLEEL 385
S + + IA +A NLK L L ++ ++ S ++ + S EE+
Sbjct: 98 S-NIPVGKNIAIVADAEDNLKDLELPKD--EASSEEQSFSSSKEEV 140
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 4.4
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +2
Query: 230 LVSCEKLSLSSNMIDKIAGIAGMRNLK-ILSLGRNYIKSLSGVETVADSLEELWISYNPI 406
L E+LSL++ M+D + + N+K LS ++SL ++VA +E I N +
Sbjct: 1612 LAENERLSLTTRMLDLQNQVKDLSNIKDSLSEDLRTLRSLE--DSVASLQKECKIKSNTV 1669
Query: 407 DKLKGI 424
+ L+ +
Sbjct: 1670 ESLQDV 1675
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 25 HHIHYIKYIFFLVVKRHLLSNNGFETYYLQRSNSSLG 135
H++ K IF++ H LS Y++QR ++LG
Sbjct: 133 HNLKCDKVIFYVHGGAHYLSTVRTNAYHIQRHTAALG 169
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,904,937
Number of Sequences: 5004
Number of extensions: 59899
Number of successful extensions: 172
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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