Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1i13
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003134-5|AAB54139.1| 357|Caenorhabditis elegans Nek (never in... 30 1.5
Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribo... 29 2.6
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 29 3.5
AF024496-1|AAB70339.1| 542|Caenorhabditis elegans Hypothetical ... 29 3.5
Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z82082-11|CAH10808.1| 721|Caenorhabditis elegans Hypothetical p... 28 6.0
Z82082-9|CAB04966.2| 586|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z49126-3|CAA88941.2| 374|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL132902-16|CAB82004.2| 721|Caenorhabditis elegans Hypothetical... 28 6.0
>AF003134-5|AAB54139.1| 357|Caenorhabditis elegans Nek (never in
mitosis kinase) likeprotein 2 protein.
Length = 357
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +3
Query: 543 NRLENFYTILNFGLQQHLNK----NTSLGNGVYLSPELSATIPHSHGGFGWGASCI 698
NR + + +FG+ + L +T +G YLSPE+ + P++ W C+
Sbjct: 146 NRRKTVLKLSDFGISKELGTKSAASTVIGTPNYLSPEICESRPYNQKSDMWSLGCV 201
>Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical
protein K08E3.5d protein.
Length = 497
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 171 ESCLRPFPPAFMKSGIKDMDELLSVITDVPALDLVLQQLDNL 296
E +RP+ G K ++SV D+ LDL +QQ+ L
Sbjct: 98 EGAIRPYKSLGTSMGCKGPKSVISVRNDLTFLDLTMQQIQTL 139
>Z47075-6|CAA87379.1| 538|Caenorhabditis elegans Hypothetical
protein E02H1.4 protein.
Length = 538
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 534 YHGNRLENFYTILNFGLQQHLNKNTSL--GNGVYLS 635
+HG R+ N ++IL GLQ + L GNGVY +
Sbjct: 385 WHGTRVTNVFSILMNGLQFPVGDRCGLMFGNGVYFA 420
>AF500111-1|AAM27196.1| 538|Caenorhabditis elegans poly ADP-ribose
metabolism enzyme-2 protein.
Length = 538
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 534 YHGNRLENFYTILNFGLQQHLNKNTSL--GNGVYLS 635
+HG R+ N ++IL GLQ + L GNGVY +
Sbjct: 385 WHGTRVTNVFSILMNGLQFPVGDRCGLMFGNGVYFA 420
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 5/71 (7%)
Frame = +3
Query: 450 IFQVISSNKSTVELKWKELSKNHNVFYAY-----HGNRLENFYTILNFGLQQHLNKNTSL 614
+F + +N E +W++L+KN N+ Y + L+++ I ++ ++ TS+
Sbjct: 140 LFSLGLNNYINFEEEWQKLNKNRNILYGFDVDTQKDETLQSYSQIRGTAMKAKISPETSI 199
Query: 615 GNGVYLSPELS 647
Y +L+
Sbjct: 200 ALSAYTISDLA 210
>AF024496-1|AAB70339.1| 542|Caenorhabditis elegans Hypothetical
protein ZC178.1 protein.
Length = 542
Score = 29.1 bits (62), Expect = 3.5
Identities = 24/103 (23%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Frame = +3
Query: 222 DMDELLSVITDVPALDLVLQQLDNLEALPNISDIIDLLF-----YVLVRLKEPTLKTV-- 380
D EL+ + D+ + +VL++LD++E + ++ DII ++ LV E T+ V
Sbjct: 315 DSVELVMSVEDI--IGVVLEELDSVELVMSVEDIIGVVLEELDSVELVMSVEDTIGVVLE 372
Query: 381 PTDVHEQILAMANTMTTPSKPQHIFQVISSNKSTVELKWKELS 509
D E ++++ +T+ + + +++ S + T+ + +EL+
Sbjct: 373 ELDSVELVMSVEDTIGVVLEELNSVELVMSVEDTIGVVLEELN 415
>Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical
protein F26H9.1 protein.
Length = 524
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 177 CLRPFPPAFMKSG--IKDMDELLSVITDVPALDLVLQQLDNLEAL 305
CL+ F +SG I + +++ T+ P D+VL+Q+D++ A+
Sbjct: 204 CLKSFMTLAYESGALIAGLGKMIHAFTNRPDEDIVLEQIDDIVAM 248
>Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical
protein F26H9.1 protein.
Length = 524
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 177 CLRPFPPAFMKSG--IKDMDELLSVITDVPALDLVLQQLDNLEAL 305
CL+ F +SG I + +++ T+ P D+VL+Q+D++ A+
Sbjct: 204 CLKSFMTLAYESGALIAGLGKMIHAFTNRPDEDIVLEQIDDIVAM 248
>Z82082-11|CAH10808.1| 721|Caenorhabditis elegans Hypothetical
protein Y71A12B.12a protein.
Length = 721
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/98 (21%), Positives = 45/98 (45%)
Frame = +3
Query: 222 DMDELLSVITDVPALDLVLQQLDNLEALPNISDIIDLLFYVLVRLKEPTLKTVPTDVHEQ 401
+ ++ ++ LD+ + NL+ + N+ ++ L L + L+ + T H
Sbjct: 168 EFSKIFPSFVNLDCLDISYSNVSNLQGISNLQNLRQLSLRGLEFKRAQDLEELFTLKHLN 227
Query: 402 ILAMANTMTTPSKPQHIFQVISSNKSTVELKWKELSKN 515
+L M+ + + +I +S NK EL++ +LS N
Sbjct: 228 VLDMSIRLKN-ALQTNIRVFLSCNKVLPELRFLDLSGN 264
>Z82082-9|CAB04966.2| 586|Caenorhabditis elegans Hypothetical
protein Y71A12B.12b protein.
Length = 586
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/98 (21%), Positives = 45/98 (45%)
Frame = +3
Query: 222 DMDELLSVITDVPALDLVLQQLDNLEALPNISDIIDLLFYVLVRLKEPTLKTVPTDVHEQ 401
+ ++ ++ LD+ + NL+ + N+ ++ L L + L+ + T H
Sbjct: 33 EFSKIFPSFVNLDCLDISYSNVSNLQGISNLQNLRQLSLRGLEFKRAQDLEELFTLKHLN 92
Query: 402 ILAMANTMTTPSKPQHIFQVISSNKSTVELKWKELSKN 515
+L M+ + + +I +S NK EL++ +LS N
Sbjct: 93 VLDMSIRLKN-ALQTNIRVFLSCNKVLPELRFLDLSGN 129
>Z49126-3|CAA88941.2| 374|Caenorhabditis elegans Hypothetical
protein DH11.4 protein.
Length = 374
Score = 28.3 bits (60), Expect = 6.0
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +3
Query: 222 DMDELLSVITDVPALDLVLQQLDNLEALP-NISDIIDLLFYVLVRLKEPTLKTV-PTDVH 395
D+ ELL+++T P + V + +ALP N + ++ + RL E TV P+ VH
Sbjct: 217 DVCELLTILTYAPTVQFVTTTVKKAKALPYNNAPFARIMLFEGRRLMEQKQTTVNPSLVH 276
Query: 396 EQILAMANTMTTPSKPQHIFQVISSNKSTVELKWKE 503
+ + SKP SSN + ++ + E
Sbjct: 277 K-------SSVDGSKPSSSSASTSSNDNPSDVSFSE 305
>AL132902-16|CAB82004.2| 721|Caenorhabditis elegans Hypothetical
protein Y71A12B.12a protein.
Length = 721
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/98 (21%), Positives = 45/98 (45%)
Frame = +3
Query: 222 DMDELLSVITDVPALDLVLQQLDNLEALPNISDIIDLLFYVLVRLKEPTLKTVPTDVHEQ 401
+ ++ ++ LD+ + NL+ + N+ ++ L L + L+ + T H
Sbjct: 168 EFSKIFPSFVNLDCLDISYSNVSNLQGISNLQNLRQLSLRGLEFKRAQDLEELFTLKHLN 227
Query: 402 ILAMANTMTTPSKPQHIFQVISSNKSTVELKWKELSKN 515
+L M+ + + +I +S NK EL++ +LS N
Sbjct: 228 VLDMSIRLKN-ALQTNIRVFLSCNKVLPELRFLDLSGN 264
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,472,260
Number of Sequences: 27780
Number of extensions: 374664
Number of successful extensions: 1143
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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