Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1i12
         (192 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039051-5|AAB94265.2|  509|Caenorhabditis elegans Hypothetical ...    27   1.8  
AL031632-4|CAA21007.1|  451|Caenorhabditis elegans Hypothetical ...    26   4.3  
AC024882-18|AAF60938.1|  392|Caenorhabditis elegans Hypothetical...    26   4.3  
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr...    25   7.4  
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p...    25   7.4  
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p...    25   7.4  
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei...    25   7.4  
Z92812-4|CAB07278.1|  313|Caenorhabditis elegans Hypothetical pr...    25   9.8  
Z92812-1|CAB07276.1|  334|Caenorhabditis elegans Hypothetical pr...    25   9.8  

>AF039051-5|AAB94265.2|  509|Caenorhabditis elegans Hypothetical
           protein C14C6.7 protein.
          Length = 509

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = -2

Query: 179 IVIVRICLVNSVVAVLGFFKITVFVNCHRFTLETFKQTTNKN 54
           I+++ IC  N++ +   FF+IT   +     +ET  +T+  +
Sbjct: 28  ILLILICFSNTIFSQEDFFEITTPASIEILAVETMPETSTSS 69


>AL031632-4|CAA21007.1|  451|Caenorhabditis elegans Hypothetical
           protein Y32B12B.5 protein.
          Length = 451

 Score = 25.8 bits (54), Expect = 4.3
 Identities = 8/33 (24%), Positives = 15/33 (45%)
 Frame = -2

Query: 185 GCIVIVRICLVNSVVAVLGFFKITVFVNCHRFT 87
           GC++I+ +C    +   L  +     + CH  T
Sbjct: 328 GCVMIIVVCFTTILFCSLNIYFFMTSIQCHMST 360


>AC024882-18|AAF60938.1|  392|Caenorhabditis elegans Hypothetical
           protein Y9C9A.16 protein.
          Length = 392

 Score = 25.8 bits (54), Expect = 4.3
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 57  FICSLFKG-FQCKPMTIDENSDLEESEY 137
           ++ + FK  FQCKPM  D+ +D+   ++
Sbjct: 12  YLSTTFKSHFQCKPMIYDQFNDVNRPKH 39


>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
          protein C36B1.1d protein.
          Length = 1175

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +3

Query: 39 YLILLIFICSLF 74
          YL+ L+FICSLF
Sbjct: 8  YLLFLLFICSLF 19


>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
          protein C36B1.1a protein.
          Length = 1138

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +3

Query: 39 YLILLIFICSLF 74
          YL+ L+FICSLF
Sbjct: 8  YLLFLLFICSLF 19


>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
          protein C36B1.1d protein.
          Length = 1175

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +3

Query: 39 YLILLIFICSLF 74
          YL+ L+FICSLF
Sbjct: 8  YLLFLLFICSLF 19


>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
          protein C36B1.1a protein.
          Length = 1138

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +3

Query: 39 YLILLIFICSLF 74
          YL+ L+FICSLF
Sbjct: 8  YLLFLLFICSLF 19


>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
          protein.
          Length = 1117

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +3

Query: 39 YLILLIFICSLF 74
          YL+ L+FICSLF
Sbjct: 8  YLLFLLFICSLF 19


>Z92812-4|CAB07278.1|  313|Caenorhabditis elegans Hypothetical
           protein T03E6.4 protein.
          Length = 313

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 6/30 (20%), Positives = 14/30 (46%)
 Frame = -2

Query: 185 GCIVIVRICLVNSVVAVLGFFKITVFVNCH 96
           GC++I+ +C    +   +  +     + CH
Sbjct: 203 GCVMIIVVCFTTILFCSINIYYFMTSIQCH 232


>Z92812-1|CAB07276.1|  334|Caenorhabditis elegans Hypothetical
           protein T03E6.1 protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 6/30 (20%), Positives = 14/30 (46%)
 Frame = -2

Query: 185 GCIVIVRICLVNSVVAVLGFFKITVFVNCH 96
           GC++I+ +C    +   +  +     + CH
Sbjct: 203 GCVMIIVVCFTTILFCSINIYYFMTSIQCH 232


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,420,973
Number of Sequences: 27780
Number of extensions: 45843
Number of successful extensions: 154
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 154
length of database: 12,740,198
effective HSP length: 43
effective length of database: 11,545,658
effective search space used: 230913160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)