Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1i12
         (192 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   1.0  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    20   3.1  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          19   5.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      19   5.4  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    19   7.1  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 1.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 78  GFQCKPMTIDENSDLEESEY 137
           GF  K    D+N+D E+++Y
Sbjct: 102 GFNNKNKDGDDNNDYEDNDY 121


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 106 TKTVILKNPSTAT 144
           T TVI+KNP+  T
Sbjct: 61  TCTVIIKNPAMQT 73


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 91  LHWKPLNRLQIKMSNIK 41
           +H KP N+ +I   N+K
Sbjct: 434 MHQKPYNKDEIIYPNLK 450


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 91  LHWKPLNRLQIKMSNIK 41
           +H KP N+ +I   N+K
Sbjct: 434 MHQKPYNKDEIIYPNLK 450


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = -1

Query: 141 CCTRILQDHC 112
           CC  I + HC
Sbjct: 70  CCGAIRESHC 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,583
Number of Sequences: 438
Number of extensions: 544
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used:  2550180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)