Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1i01
         (448 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   1.5  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    23   1.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   6.1  
DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse tr...    21   8.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   8.1  

>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 442 FSWHMYIERSEFIQFFSYKS 383
           F W  Y+ RSE I +++  S
Sbjct: 441 FYWFAYLSRSERINYYNVNS 460


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 377 LSRIFSIFLSLHFPASIQGPLLYERTRPLSQ 285
           LS +F +F+  +FP+ I     Y +  P+S+
Sbjct: 34  LSNLFWLFVGTYFPSLIGANEHYSKFFPVSE 64


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 73  CKMKVLWGIVLFSSFASKLIE 135
           CK + LW   + S F+ + IE
Sbjct: 94  CKEEALWNFPMISVFSRQDIE 114


>DQ494417-1|ABF55368.1|   42|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 42

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 367 FFQFFCLYTSPLLYKDLC 314
           +FQ +CL+   L+ K+ C
Sbjct: 17  YFQQYCLHHKILIKKNKC 34


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)
 Frame = +1

Query: 277 GCYCDKGLVRSYSKGPCIEA--GKCRDKKIEKILDNLPIYKK 396
           GC+C  G      K  C E   GK + +      +  P + K
Sbjct: 246 GCHCKPGYQADVEKQECTECPIGKFKHEAGSHSCEACPAHSK 287


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 95  ESFCSPRLHLS*LRAPH 145
           +  CSP+LH+  L   H
Sbjct: 151 QPMCSPKLHVFDLNTSH 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,860
Number of Sequences: 438
Number of extensions: 2426
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)