Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1h19
(761 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 197 7e-51
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 197 9e-51
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 193 1e-49
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 192 2e-49
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 155 4e-38
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117... 151 8e-37
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 124 6e-29
09_02_0283 + 6819086-6820270 34 0.11
05_07_0068 - 27469929-27471050 32 0.43
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532... 31 1.0
08_01_0017 + 132109-132924 31 1.3
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 30 2.3
05_07_0288 + 29001228-29001399,29001493-29001723,29001817-290019... 29 3.1
08_01_0680 - 5958066-5960253,5960707-5961503 29 4.0
01_06_0765 - 31808775-31809443,31809547-31809703,31809777-318098... 29 4.0
02_05_0184 + 26543156-26544019 29 5.3
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 28 7.1
03_06_0416 - 33780911-33781861 28 7.1
01_06_0416 - 29195666-29196946 28 7.1
03_06_0615 + 35118336-35120402 28 9.3
03_02_0792 + 11236785-11237337,11237711-11238261,11238446-112386... 28 9.3
03_02_0576 - 9587698-9588636 28 9.3
02_05_0741 + 31408615-31409130 28 9.3
02_01_0351 - 2535305-2535627,2535707-2535842,2535942-2535977,253... 28 9.3
01_06_1642 + 38857326-38857581,38858577-38858818,38859001-388600... 28 9.3
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 197 bits (481), Expect = 7e-51
Identities = 91/161 (56%), Positives = 118/161 (73%)
Frame = +3
Query: 279 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 458
SG L+ P NKG+AF+ ER + GLLPP + +QE Q + ++ Y PL +YI
Sbjct: 30 SGYTLLRDPRHNKGLAFSEAERDAHYLRGLLPPSIVSQELQEKKLMHNLRNYTVPLQRYI 89
Query: 459 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 638
+M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG +
Sbjct: 90 AMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKI 149
Query: 639 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKL 761
+VLKNWPE ++ IVVTDGERILGLGDLG GMGIPVGKL
Sbjct: 150 LEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKL 190
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 197 bits (480), Expect = 9e-51
Identities = 89/161 (55%), Positives = 122/161 (75%)
Frame = +3
Query: 279 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 458
SG L+ P NKG+AF+ +ER + GLLPP V +Q+ QV+ ++ +Y PL +Y+
Sbjct: 99 SGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYM 158
Query: 459 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 638
+M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++R+P+GL++++ DKG V
Sbjct: 159 AMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKV 218
Query: 639 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKL 761
DVL+NWPE +++ IVVTDGERILGLGDLG GMGIPVGKL
Sbjct: 219 LDVLRNWPERNIQVIVVTDGERILGLGDLGCQGMGIPVGKL 259
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 193 bits (471), Expect = 1e-49
Identities = 88/161 (54%), Positives = 118/161 (73%)
Frame = +3
Query: 279 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 458
SG + L+ P NKG+AF ER+ + GLLPP + +QE Q +I +Y+ PL KY+
Sbjct: 53 SGYNLLRDPRYNKGLAFNERERETHYLRGLLPPAIVSQELQERKIMHNIRQYQLPLQKYM 112
Query: 459 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 638
+M L + NE LFY+ + DNV E++P+VYTPTVG ACQK+G ++ RP+GL+I++ +KG +
Sbjct: 113 AMMDLQEGNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFSRPQGLYISLKEKGKI 172
Query: 639 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKL 761
+VLKNWPE ++ IVVTDGERILGLGDLG GMGIPVGKL
Sbjct: 173 LEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKL 213
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 192 bits (469), Expect = 2e-49
Identities = 87/161 (54%), Positives = 121/161 (75%)
Frame = +3
Query: 279 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 458
SG L+ P NKG++FT +ER + GLLPP V +QE Q + ++ +++ PL +Y+
Sbjct: 33 SGHSLLRDPRHNKGLSFTEKERDAHYLRGLLPPVVLSQELQEKRLLQNVRQFQVPLQRYM 92
Query: 459 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 638
LM L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++RRP+GL+I++ +KG +
Sbjct: 93 ALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGRI 152
Query: 639 YDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKL 761
++L+NWPE ++ IVVTDGERILGLGDLG GMGIPVGKL
Sbjct: 153 LELLRNWPEKSIQVIVVTDGERILGLGDLGCQGMGIPVGKL 193
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 155 bits (376), Expect = 4e-38
Identities = 80/170 (47%), Positives = 104/170 (61%), Gaps = 10/170 (5%)
Frame = +3
Query: 282 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYEN------- 440
G D L P NK AF + ER LG+ GLLPPRV + E+Q + S E+
Sbjct: 46 GTDILHDPWFNKDTAFPMTERDRLGLRGLLPPRVMSFEQQYDRFINSFRSLEHNTRGEPD 105
Query: 441 ---PLNKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLF 611
L K+ L L DRNE L+YR + DN+ + PI+YTPTVGL C+ + ++RRPRG++
Sbjct: 106 TIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMY 165
Query: 612 ITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLGDLGACGMGIPVGKL 761
+ DKG + ++ NWP V IVVTDG RILGLGDLG G+GIP+GKL
Sbjct: 166 FSAKDKGEMMSMIYNWPAEKVDMIVVTDGSRILGLGDLGVQGIGIPIGKL 215
>02_05_0228 -
27010982-27011272,27011401-27011506,27011616-27011767,
27011919-27011930
Length = 186
Score = 151 bits (365), Expect = 8e-37
Identities = 63/95 (66%), Positives = 81/95 (85%)
Frame = +3
Query: 477 DRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKN 656
+R+E LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG + +VLKN
Sbjct: 5 ERSERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKILEVLKN 64
Query: 657 WPETDVRAIVVTDGERILGLGDLGACGMGIPVGKL 761
WPE ++ IV+TDGERILGLGDLG GMGIPVGKL
Sbjct: 65 WPERSIQVIVITDGERILGLGDLGCQGMGIPVGKL 99
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 124 bits (300), Expect = 6e-29
Identities = 76/194 (39%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Frame = +3
Query: 210 YSEMERDRIGLWGSGDGQPTSGLSGLDHLKHPGLNKGMAFTIEERQL------LGIHGLL 371
+S ERDR+GL G S +D P L F E + + L +
Sbjct: 60 FSMTERDRLGLRGLLPPNVVSSQQQIDRFT-PTLKYQYKFHSEIQHIDAKGLALNYLNIS 118
Query: 372 PPRVKTQEEQVELCKLSIDRYEN--PLNKYIYLMGLLDRNEHLFYR--FVADNVAEMMPI 539
P ++ + V K + D + PL K+ L L DRNE ++Y+ + DN+ E PI
Sbjct: 119 PAICESSQYCVNADKYARDGPSDTYPLAKWRILNRLHDRNETMYYKAEVLIDNIEEHAPI 178
Query: 540 VYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKNWPETDVRAIVVTDGERILGLG 719
VYTPTVGL CQ + ++RRPRG++ + D+G + ++ NWP V IVVTDG RILGLG
Sbjct: 179 VYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLG 238
Query: 720 DLGACGMGIPVGKL 761
DLG G+GI +GKL
Sbjct: 239 DLGVHGIGIAIGKL 252
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +3
Query: 282 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVE 407
G D L P N+G F++ ER LG+ GLLPP V + ++Q++
Sbjct: 45 GSDILHDPWFNRGTGFSMTERDRLGLRGLLPPNVVSSQQQID 86
>09_02_0283 + 6819086-6820270
Length = 394
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/51 (39%), Positives = 22/51 (43%)
Frame = -1
Query: 194 ACRLRLLDCRERNASFVTVSGGRWTHCGFAPNLYHSRTLVALFSTRTTHTD 42
ACRL L D + +A V GG WTHCG P A T TD
Sbjct: 158 ACRLALGDGEDTSAVEVHERGG-WTHCGAVPTALRESAAAAATWLSTAATD 207
>05_07_0068 - 27469929-27471050
Length = 373
Score = 32.3 bits (70), Expect = 0.43
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = -2
Query: 463 R*MYLLSGFSYLSIESLHSSTCSSCVLTRGGNNPWIPKS*RSSMVKAIPLLRPGCLRWSR 284
R + L++ ++ L + S+ SS S T GG N W+ +S+ PLL G L R
Sbjct: 8 RMLLLMANYAALLVGSVASSLLSRFYFTHGGRNRWVVTLVQSA---GFPLLVAGALAGGR 64
Query: 283 P 281
P
Sbjct: 65 P 65
>05_05_0165 +
22851863-22852566,22852811-22852964,22853112-22853261,
22853769-22853930,22854070-22854242,22854330-22854396,
22854556-22854722,22855216-22855374,22856187-22856276,
22856392-22856483,22856587-22856681,22857328-22857405,
22858364-22858459,22859132-22859206,22859290-22859381,
22859462-22859624,22859734-22859794,22860016-22860116,
22860567-22860614
Length = 908
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -2
Query: 319 PLLRPGCLRWSRPERPL--VGCPSPEPHNPIRSRSIS 215
PL PGC R R R L + PSP P + RS+S+S
Sbjct: 22 PLRSPGCRRRRRRGRVLSALSSPSPSPSSASRSQSVS 58
>08_01_0017 + 132109-132924
Length = 271
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2
Query: 454 YLLSGFSYLSIESLHSSTCSSC 389
YL +GFS+ S +S HSSTCS C
Sbjct: 84 YLSAGFSFASRDS-HSSTCSCC 104
>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
Length = 514
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -2
Query: 355 PKS*RSSMVKAIPLLRPGCLRWSRPERPLVG-CPSPEPHNPIRS 227
P+S SS K +PL RP SRPE P S P P S
Sbjct: 217 PQSSHSSYSKILPLFRPKSNSRSRPESPAASDAASQTPFRPTES 260
>05_07_0288 +
29001228-29001399,29001493-29001723,29001817-29001914,
29002687-29002873,29003068-29003198,29003282-29003908
Length = 481
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 218 FAIRTLPSACRLRLLDCRERNASFVTVSGGRWTHCGF 108
F + A RL + + A+FV S G+W H GF
Sbjct: 29 FDVEAASGARRLGIKPAADAGAAFVLESKGKWWHAGF 65
>08_01_0680 - 5958066-5960253,5960707-5961503
Length = 994
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 201 KCTYSEMERDRIGLWGSGDGQPTSGLSGLDHLKHPGL 311
K Y E R+ IG WGSG G+ + HL + L
Sbjct: 380 KKEYWESIRNSIGTWGSGTNPTLEGMRQILHLSYKDL 416
>01_06_0765 -
31808775-31809443,31809547-31809703,31809777-31809894,
31810170-31810308
Length = 360
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Frame = -3
Query: 669 PSPASS*EHRIHVPYRGS**RGPLVGGTQGRTSDRPGQPSECTQLASFQPRYPR-RNGRT 493
P PA RI+ G R QGR R QP+ LAS + PR R
Sbjct: 31 PGPALRVTPRINARAAGRDRRTRREDRDQGRPGGRTEQPAPAAGLASSRRSMPRSRGSEL 90
Query: 492 DAHCGPRAP 466
PRAP
Sbjct: 91 PQRASPRAP 99
>02_05_0184 + 26543156-26544019
Length = 287
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +3
Query: 96 QIRSESAMSPAPPAHCNKTGVPFSAVKQSQATSGGKCTYSEMERDRIGLWGSGDGQPTSG 275
Q++ + + SPAPP C G A ++ A +G E E G G+G+G+ G
Sbjct: 36 QLKRKRSTSPAPPPGCG-GGQGQEAAVETDADAGAA---GEEESSSCGGAGAGEGERKRG 91
Query: 276 LSGLDHLKHPGLNK 317
+G H + G+ +
Sbjct: 92 DAG-RHPSYRGVRR 104
>04_04_1630 -
34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -3
Query: 759 VCPQGCPSRMRPSRPDPEYVLRRLQQWRGRPSPAS 655
V P+ R +PS P +YV RRL + P PA+
Sbjct: 302 VSPKTTAKRAKPSPPPSDYVRRRLLEPPRPPPPAA 336
>03_06_0416 - 33780911-33781861
Length = 316
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -3
Query: 609 RGPLVGGTQGRTSDRPGQPSECTQLASFQPRYPRRNGRTDAHCGPRAP 466
R P GGT R + P P+ P P R GR PRAP
Sbjct: 17 RSPTAGGTPSRLAVAPPSPTTPQCAIPASPHTPGR-GRAPPPATPRAP 63
>01_06_0416 - 29195666-29196946
Length = 426
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 349 SWGSTGCYHHESRRKRSRLNYASSRSTDTKIHLTSTSILWGSW 477
SW + G E R + + S +TD +++LT S W SW
Sbjct: 204 SWTACGPMPAELRESAAA-TWLSVAATDQRVYLTDRSTGWASW 245
>03_06_0615 + 35118336-35120402
Length = 688
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -1
Query: 665 LRPVLKNIVYMSLIVDRDE-EAPWSAVHKAELLTGQANR 552
L P +VY+S V E + W+AV+ EL TG+ R
Sbjct: 139 LTPDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRR 177
>03_02_0792 +
11236785-11237337,11237711-11238261,11238446-11238628,
11238768-11238966,11239055-11239761
Length = 730
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -1
Query: 680 GADVRLRPVLKNIVYMSLIVD-RDEEAPWSAVHKAELLTGQANR 552
G +V R V +VY+S R+ +PW+ +K L TG+ R
Sbjct: 137 GYEVDGRTVDHYLVYVSTKEPVRERRSPWNVAYKTNLRTGETER 180
>03_02_0576 - 9587698-9588636
Length = 312
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/48 (27%), Positives = 18/48 (37%)
Frame = -2
Query: 304 GCLRWSRPERPLVGCPSPEPHNPIRSRSISLYVHFPPLVACDCLTAEN 161
G ++W P P P P +R S PPL C +E+
Sbjct: 226 GVIKWRPPPAPAAAAARPPPPPAFPTRRSSSAASDPPLKRCSSARSES 273
>02_05_0741 + 31408615-31409130
Length = 171
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = -2
Query: 340 SSMVKAIPLLRPGCL---RWSRPERPLVGCPSPEPHNPIRSRSISLYVH--FPPLV 188
SS V+ +P LRP C RW R ER ++ P RSR +S H PP V
Sbjct: 76 SSSVQILPPLRPRCTRIRRWQRQERRIL----RPLLLPCRSRHLSTPTHSNLPPAV 127
>02_01_0351 -
2535305-2535627,2535707-2535842,2535942-2535977,
2536057-2536173
Length = 203
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +3
Query: 36 VYIRMSCPCRKQGDQCPAVVQIRSESAMSPAPPAHCNKTG 155
VY++++CPC ++ C + Q+ P P+ G
Sbjct: 40 VYLKLTCPCFQRLSTCRGMYQMSMNENTQPQGPSFLEMLG 79
>01_06_1642 +
38857326-38857581,38858577-38858818,38859001-38860004,
38860170-38860587,38860673-38860789
Length = 678
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +1
Query: 370 YHHESRRKRSRLNYASSRSTDTKIHLTSTSILWGSW 477
++ +SRR++ N+ +SR T + L ++LW W
Sbjct: 604 HYQKSRRQKEHDNFWNSRWTRKFLFLLCLAVLWKHW 639
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,977,175
Number of Sequences: 37544
Number of extensions: 609294
Number of successful extensions: 1895
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1892
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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