Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1h18
         (692 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0821 - 27960414-27961253                                         40   0.002
01_03_0093 - 12422558-12422607,12422679-12422935,12423565-124239...    28   6.1  

>03_05_0821 - 27960414-27961253
          Length = 279

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
 Frame = +1

Query: 415 LHVIHHG--IMPMSVWFGVK--FTPGGHSTFFGMLNTFVHIVMYSYYLLAALGPQVQKYL 582
           LHV HH   I    +W   +    P   +T     N  VH+ MY YYL  +LG +     
Sbjct: 149 LHVYHHAAVIAMCYLWLATRQSLMPIALAT-----NAAVHVAMYGYYLCCSLGLRWPPR- 202

Query: 583 WWKKYLTALQMVQFVLVFIHAFQLLF 660
            WK+ +T LQ+ QF+  F  +  +L+
Sbjct: 203 -WKRAVTELQIAQFLFSFAASAVMLW 227


>01_03_0093 -
           12422558-12422607,12422679-12422935,12423565-12423932,
           12423939-12424800,12425247-12425464
          Length = 584

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +3

Query: 465 QIYTWWSLHILRYAQYFRTHRNVFILLAGSPRTAGSEVSVVEEIPNRSSNGPVRTRV 635
           Q+  W   H+        TH  VF +   +P + G  +S VEE+P R+S  P   RV
Sbjct: 86  QVLAWLENHLEHEICEDGTH-TVFDVCQHNPESVG-RLSDVEELPGRNSKEPKVCRV 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,179,804
Number of Sequences: 37544
Number of extensions: 375903
Number of successful extensions: 783
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 782
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)