Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1h18
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain po... 57 1e-08
Z19154-3|CAA79555.1| 291|Caenorhabditis elegans Hypothetical pr... 54 7e-08
U61954-12|AAK29807.1| 274|Caenorhabditis elegans Fatty acid elo... 54 7e-08
Z81058-5|CAB02921.1| 274|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U41011-5|AAA82288.2| 320|Caenorhabditis elegans Fatty acid elon... 51 9e-07
Z68749-1|CAA92960.2| 309|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AL132949-2|CAB61069.1| 286|Caenorhabditis elegans Hypothetical ... 46 2e-05
U61954-9|AAK29808.1| 286|Caenorhabditis elegans Fatty acid elon... 31 0.78
Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical pr... 29 4.2
U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate rece... 29 4.2
U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate rece... 29 4.2
AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel... 29 4.2
AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologou... 29 4.2
AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA iono... 29 4.2
AF068709-14|AAC19258.2| 312|Caenorhabditis elegans Serpentine r... 28 7.3
AF025453-12|AAK31405.1| 600|Caenorhabditis elegans Hypothetical... 28 7.3
AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine re... 27 9.6
>Z68749-3|CAA92958.1| 288|Caenorhabditis elegans Hypothetical
protein F56H11.4 protein.
Length = 288
Score = 56.8 bits (131), Expect = 1e-08
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Frame = +1
Query: 127 VLGPK-LMENRKPFELKQVLIWYNLFQVIFSCWLFYESIVSGWFTTYSFRCQPVDYSNTP 303
V G K M NR+PF+L L +N FS + +F T + + Y
Sbjct: 58 VFGTKWFMRNRQPFQLTIPLNIWNFILAAFSI-AGAVKMTPEFFGTIANKGIVASYCKVF 116
Query: 304 ETLRTVNGCW-WYYXXXXXXXXXXXXXVMRKKFDHVSKLHVIHHGIMPMSVWFGVKFTPG 480
+ + NG W W + ++ +K + LH HH + + W+ TPG
Sbjct: 117 DFTKGENGYWVWLFMASKLFELVDTIFLVLRKRP-LMFLHWYHHILTMIYAWYSHPLTPG 175
Query: 481 GHSTFFGM-LNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFVL---VFIHAF 648
+ +G+ LN VH MYSYY L ++ +V ++ + +T+LQ+VQF++ V H
Sbjct: 176 FNR--YGIYLNFVVHAFMYSYYFLRSMKIRVPGFI--AQAITSLQIVQFIISCAVLAHLG 231
Query: 649 QLLFI---DCDY-PRAF 687
L+ +CD+ P F
Sbjct: 232 YLMHFTNANCDFEPSVF 248
>AF244356-1|AAF70462.1| 288|Caenorhabditis elegans long chain
polyunsaturated fattyacid elongation enzyme protein.
Length = 288
Score = 56.8 bits (131), Expect = 1e-08
Identities = 54/197 (27%), Positives = 88/197 (44%), Gaps = 10/197 (5%)
Frame = +1
Query: 127 VLGPK-LMENRKPFELKQVLIWYNLFQVIFSCWLFYESIVSGWFTTYSFRCQPVDYSNTP 303
V G K M NR+PF+L L +N FS + +F T + + Y
Sbjct: 58 VFGTKWFMRNRQPFQLTIPLNIWNFILAAFSI-AGAVKMTPEFFGTIANKGIVASYCKVF 116
Query: 304 ETLRTVNGCW-WYYXXXXXXXXXXXXXVMRKKFDHVSKLHVIHHGIMPMSVWFGVKFTPG 480
+ + NG W W + ++ +K + LH HH + + W+ TPG
Sbjct: 117 DFTKGENGYWVWLFMASKLFELVDTIFLVLRKRP-LMFLHWYHHILTMIYAWYSHPLTPG 175
Query: 481 GHSTFFGM-LNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFVL---VFIHAF 648
+ +G+ LN VH MYSYY L ++ +V ++ + +T+LQ+VQF++ V H
Sbjct: 176 FNR--YGIYLNFVVHAFMYSYYFLRSMKIRVPGFI--AQAITSLQIVQFIISCAVLAHLG 231
Query: 649 QLLFI---DCDY-PRAF 687
L+ +CD+ P F
Sbjct: 232 YLMHFTNANCDFEPSVF 248
>Z19154-3|CAA79555.1| 291|Caenorhabditis elegans Hypothetical
protein C40H1.4 protein.
Length = 291
Score = 54.4 bits (125), Expect = 7e-08
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 9/172 (5%)
Frame = +1
Query: 139 KLMENRKPFELKQVLIWYN----LFQVI----FSCWLFYESIVSGWFTTYSFRCQPVDYS 294
K MENRKPF LK LI +N F +I FS G++ T + C P D +
Sbjct: 71 KFMENRKPFTLKYPLILWNGALAAFSIIATLRFSIDPLRSLYAEGFYKTLCYSCNPTDVA 130
Query: 295 NTPETLRTVNGCWWYYXXXXXXXXXXXXXVMRKKFDHVSKLHVIHHG-IMPMSVWFGVKF 471
+ + ++RK+ + LH HH ++ +V G +
Sbjct: 131 --------AFWSFAFALSKIVELGDTMFIILRKR--PLIFLHYYHHAAVLIYTVHSGAEH 180
Query: 472 TPGGHSTFFGMLNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFV 627
T G F+ ++N F H +MY+YY ++A+G ++ K W +T +Q Q +
Sbjct: 181 TAAGR--FYILMNYFAHSLMYTYYTVSAMGYRLPK--WVSMTVTTVQTTQML 228
>U61954-12|AAK29807.1| 274|Caenorhabditis elegans Fatty acid
elongation protein 6 protein.
Length = 274
Score = 54.4 bits (125), Expect = 7e-08
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 8/182 (4%)
Frame = +1
Query: 142 LMENRKPFELKQVLIWYNLFQVIFSCW--------LFYESIVSGWFTTYSFRCQPVDYSN 297
+M NRKPF+L L +N IFS L +E G+F +Y D+ N
Sbjct: 50 VMTNRKPFDLTGPLNLWNAGLAIFSTLGSLATTFGLLHEFFSRGFFESY---IHIGDFYN 106
Query: 298 TPETLRTVNGCWWYYXXXXXXXXXXXXXVMRKKFDHVSKLHVIHHGIMPMSVWFGVKFTP 477
+ T W + ++RKK + LH HH ++ M+ F
Sbjct: 107 GLSGMFT----WLFVLSKVAEFGDTLFIILRKK--PLMFLHWYHH-VLTMNYAFMSFEAN 159
Query: 478 GGHSTFFGMLNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFVLVFIHAFQLL 657
G +T+ +N VH +MY YY+L + G +V W K +T +Q++QFV+ F +
Sbjct: 160 LGFNTWITWMNFSVHSIMYGYYMLRSFGVKVP--AWIAKNITTMQILQFVITHFILFHVG 217
Query: 658 FI 663
++
Sbjct: 218 YL 219
>Z81058-5|CAB02921.1| 274|Caenorhabditis elegans Hypothetical
protein F11E6.5 protein.
Length = 274
Score = 52.4 bits (120), Expect = 3e-07
Identities = 52/180 (28%), Positives = 78/180 (43%), Gaps = 3/180 (1%)
Frame = +1
Query: 133 GPKLMENRKPFELKQVLIWYNLFQVIFSCWLFYESI--VSGWFTTYSFRCQPVDYSNTPE 306
G KLM +RKPF+L+ L +N +FS Y+ I + G F F N
Sbjct: 50 GQKLMAHRKPFDLQNTLALWNFGFSLFSGIAAYKLIPELFGVFMKDGFVASYCQNENYYT 109
Query: 307 TLRTVNGCWWYYXXXXXXXXXXXXXVMRKKFDHVSKLHVIHHGIMPMSVWFGVKFTPGGH 486
T W + V+RKK V +H HH + V+ V ++
Sbjct: 110 DASTGFWGWAFVMSKAPELGDTMFLVLRKK--PVIFMHWYHHAL--TFVYAVVTYSEHQA 165
Query: 487 STFFGM-LNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFVLVFIHAFQLLFI 663
+ + LN VH VMY Y+ + AL Q + + K++T +Q+VQFV+ L+FI
Sbjct: 166 WARWSLALNLAVHTVMYFYFAVRALNIQTPRPV--AKFITTIQIVQFVISCYIFGHLVFI 223
>U41011-5|AAA82288.2| 320|Caenorhabditis elegans Fatty acid
elongation protein 3 protein.
Length = 320
Score = 50.8 bits (116), Expect = 9e-07
Identities = 49/170 (28%), Positives = 75/170 (44%), Gaps = 4/170 (2%)
Frame = +1
Query: 133 GPKLMENRKPFELKQVLIWYNLFQVIFSCWLFYESIVSGWFTTYSFRCQPVDYSNTPET- 309
G K+ME KPF+L L +N F IFS L + + + ++S YS +
Sbjct: 55 GKKIMEKYKPFQLDTPLFVWNSFLAIFSI-LGFLRMTPEFVWSWSAEGNSFKYSICHSSY 113
Query: 310 LRTVNGCW--WYYXXXXXXXXXXXXXVMRKKFDHVSKLHVIHHGIMPMSVWFGVK-FTPG 480
+ V G W + V+RK+ + LH HH + + W K T
Sbjct: 114 AQGVTGFWTEQFAMSKLFELIDTIFIVLRKR--PLIFLHWYHHVTVMIYTWHAYKDHTAS 171
Query: 481 GHSTFFGMLNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFVL 630
G +F +N VH +MYSYY L +L ++ K + +T LQ+ Q V+
Sbjct: 172 GR--WFIWMNYGVHALMYSYYALRSLKFRLPKQM--AMVVTTLQLAQMVM 217
>Z68749-1|CAA92960.2| 309|Caenorhabditis elegans Hypothetical
protein F56H11.3 protein.
Length = 309
Score = 47.2 bits (107), Expect = 1e-05
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 7/181 (3%)
Frame = +1
Query: 139 KLMENRKPFELKQVLIWYNLFQVIFSC---WLFYESIVSGWFTTYSFRCQPVDYSNTPET 309
+ M +R+PF+L L +N F +FS W + +V + C SN P
Sbjct: 85 RFMRDREPFQLTTALRLWNFFLSVFSIYGSWTMFPFMVQQIRLYGLYGCGCEALSNLPSQ 144
Query: 310 LRTVNGCWWYYXXXXXXXXXXXXX---VMRKKFDHVSKLHVIHHGIMPMSVWFGVKF-TP 477
+W + V+RKK + LH HH M V+F + TP
Sbjct: 145 AE-----YWLFLTILSKAVEFVDTFFLVLRKK--PLIFLHWYHH--MATFVFFCSNYPTP 195
Query: 478 GGHSTFFGMLNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFVLVFIHAFQLL 657
S ++N FVH MY YY ++ +V + +T LQ+ QF + FI+ L+
Sbjct: 196 SSQSRVGVIVNLFVHAFMYPYYFTRSMNIKVPAKI--SMAVTVLQLTQF-MCFIYGCTLM 252
Query: 658 F 660
+
Sbjct: 253 Y 253
>AL132949-2|CAB61069.1| 286|Caenorhabditis elegans Hypothetical
protein Y53F4B.2 protein.
Length = 286
Score = 46.4 bits (105), Expect = 2e-05
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 3/167 (1%)
Frame = +1
Query: 139 KLMENRKPFELKQVLIWYNLFQVIFSCWLFYESIVSGWFTTYSFRCQPVDYSNTPETLRT 318
+ ME+RKP ++ +L+ +N F +FS + + F FR +D R+
Sbjct: 68 RYMESRKPKSMRPLLLAWNGFLAVFSIMGTWRFGIE--FYDAVFRRGFIDSICLAVNPRS 125
Query: 319 VNGCW--WYYXXXXXXXXXXXXXVMRKKFDHVSKLHVIHHGIMPMSVWFG-VKFTPGGHS 489
+ W + V+RK+ V LH HH ++ + W ++ T G
Sbjct: 126 PSAFWACMFALSKIAEFGDTMFLVLRKR--PVIFLHWYHHAVVLILSWHAAIELTAPGR- 182
Query: 490 TFFGMLNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFVL 630
+F +N VH +MY+YY + ++G ++ K + +T LQ +Q ++
Sbjct: 183 -WFIFMNYLVHSIMYTYYAITSIGYRLPKIV--SMTVTFLQTLQMLI 226
>U61954-9|AAK29808.1| 286|Caenorhabditis elegans Fatty acid
elongation protein 5 protein.
Length = 286
Score = 31.1 bits (67), Expect = 0.78
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 484 HSTFFGMLNTFVHIVMYSYYLLAALGPQVQKYLWWKKYLTALQMVQFVL 630
H + +N +H MY YYLL +L + + + +T QMVQF +
Sbjct: 168 HMVWVVWMNYIIHAFMYGYYLLKSLKVPIPPSV--AQAITTSQMVQFAV 214
>Z66514-3|CAA91343.1| 854|Caenorhabditis elegans Hypothetical
protein K01A11.4 protein.
Length = 854
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 436 IMPMSVWFGVKFTPGGHSTFFGMLNTFV-HIVMYSYYLLAA-LGPQVQKYLWWKKYLTAL 609
+MP V F P +T L F+ HI MY +L+AA L P + Y W +
Sbjct: 336 LMPFLVMLHA-FMPTKGTTMCVPLARFIAHITMYLVFLIAAILRPTIGFYFAWTDSIEV- 393
Query: 610 QMVQFVLVFIHAF 648
VQ + +F++A+
Sbjct: 394 -TVQALEIFMYAY 405
>U10438-16|AAO61447.1| 977|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform b protein.
Length = 977
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 250 WFTTYSFRCQPVDYSNTPETLRTVNGCWWYY 342
WFT +F Q D + R + CWW++
Sbjct: 670 WFTLAAFMQQGTDILPRAVSGRIASSCWWFF 700
>U10438-15|AAA19090.3| 908|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 2, isoform a protein.
Length = 908
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 250 WFTTYSFRCQPVDYSNTPETLRTVNGCWWYY 342
WFT +F Q D + R + CWW++
Sbjct: 601 WFTLAAFMQQGTDILPRAVSGRIASSCWWFF 631
>AY342006-1|AAQ22724.1| 854|Caenorhabditis elegans TRP-3 channel
protein protein.
Length = 854
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 436 IMPMSVWFGVKFTPGGHSTFFGMLNTFV-HIVMYSYYLLAA-LGPQVQKYLWWKKYLTAL 609
+MP V F P +T L F+ HI MY +L+AA L P + Y W +
Sbjct: 336 LMPFLVMLHA-FMPTKGTTMCVPLARFIAHITMYLVFLIAAILRPTIGFYFAWTDSIEV- 393
Query: 610 QMVQFVLVFIHAF 648
VQ + +F++A+
Sbjct: 394 -TVQALEIFMYAY 405
>AJ276029-1|CAC81656.1| 854|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 854
Score = 28.7 bits (61), Expect = 4.2
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 436 IMPMSVWFGVKFTPGGHSTFFGMLNTFV-HIVMYSYYLLAA-LGPQVQKYLWWKKYLTAL 609
+MP V F P +T L F+ HI MY +L+AA L P + Y W +
Sbjct: 336 LMPFLVMLHA-FMPTKGTTMCVPLARFIAHITMYLVFLIAAILRPTIGFYFAWTDSIEV- 393
Query: 610 QMVQFVLVFIHAF 648
VQ + +F++A+
Sbjct: 394 -TVQALEIFMYAY 405
>AF318606-1|AAK01094.2| 977|Caenorhabditis elegans non-NMDA
ionotropic glutamate receptorsubunit GLR-2 protein.
Length = 977
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 250 WFTTYSFRCQPVDYSNTPETLRTVNGCWWYY 342
WFT +F Q D + R + CWW++
Sbjct: 670 WFTLAAFMQQGTDILPRAVSGRIASSCWWFF 700
>AF068709-14|AAC19258.2| 312|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 61 protein.
Length = 312
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 453 LVWRQIYTWWSLHI-LRYAQYFRTHRNVFILLA 548
L W + +TWW +HI A HR IL A
Sbjct: 98 LTWCRYFTWWFMHIQFLTASVLSVHRITAILSA 130
>AF025453-12|AAK31405.1| 600|Caenorhabditis elegans Hypothetical
protein C08F1.8 protein.
Length = 600
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 407 CQSCTSFTTVSCQCPFGLASNLHLVVTPHSSVCSILSYT 523
C S SF T++ + + + L L+V S CS ++YT
Sbjct: 446 CTSYLSFVTITALMGYAVCNLLVLLVEQLSETCSPMNYT 484
>AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 66 protein.
Length = 330
Score = 27.5 bits (58), Expect = 9.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 453 LVWRQIYTWWSLHI 494
L W + +TWW LHI
Sbjct: 98 LAWTKYFTWWFLHI 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,384,412
Number of Sequences: 27780
Number of extensions: 359449
Number of successful extensions: 905
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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