Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1h18
         (692 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    26   0.39 
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    26   0.39 
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    26   0.39 
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    26   0.39 
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    25   0.90 
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    25   0.90 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.6  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   3.6  

>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 555 PRTAGSEVSVVEEIPNRSSNGPVRTRVHSCVPATVHRLRLSTSIR 689
           PR+ G  +S+ E+IP     GP  T     +P   +R R S + R
Sbjct: 128 PRSMGPWISIQEQIPRFRHIGP-STPFPRFIPPNAYRFRPSLNPR 171


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 555 PRTAGSEVSVVEEIPNRSSNGPVRTRVHSCVPATVHRLRLSTSIR 689
           PR+ G  +S+ E+IP     GP  T     +P   +R R S + R
Sbjct: 128 PRSMGPWISIQEQIPRFRHIGP-STPFPRFIPPNAYRFRPSLNPR 171


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 555 PRTAGSEVSVVEEIPNRSSNGPVRTRVHSCVPATVHRLRLSTSIR 689
           PR+ G  +S+ E+IP     GP  T     +P   +R R S + R
Sbjct: 128 PRSMGPWISIQEQIPRFRHIGP-STPFPRFIPPNAYRFRPSLNPR 171


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 555 PRTAGSEVSVVEEIPNRSSNGPVRTRVHSCVPATVHRLRLSTSIR 689
           PR+ G  +S+ E+IP     GP  T     +P   +R R S + R
Sbjct: 361 PRSMGPWISIQEQIPRFRHIGP-STPFPRFIPPNAYRFRPSLNPR 404


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 555 PRTAGSEVSVVEEIPNRSSNGPVRTRVHSCVPATVHRLR 671
           PR  G  +S+ E+IP     GP+ T     +P   +R R
Sbjct: 129 PRPMGPWISIQEQIPRFRHIGPL-TPFPRFIPPNAYRFR 166


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 555 PRTAGSEVSVVEEIPNRSSNGPVRTRVHSCVPATVHRLR 671
           PR  G  +S+ E+IP     GP+ T     +P   +R R
Sbjct: 370 PRPMGPWISIQEQIPRFRHIGPL-TPFPRFIPPNAYRFR 407


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 585 VEEIPNRSSNGPVRTRVHS 641
           V++ PNR + G +RT++ S
Sbjct: 387 VDKHPNRRARGQLRTKIES 405



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 283 VDYSNTPETLRTVNGC 330
           V + NTPE  + +N C
Sbjct: 98  VQFRNTPEVHQAINTC 113


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 568 VQKYLWWKK 594
           VQK+LWW K
Sbjct: 78  VQKFLWWYK 86


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 568 VQKYLWWKK 594
           VQK+LWW K
Sbjct: 78  VQKFLWWYK 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,744
Number of Sequences: 438
Number of extensions: 4352
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)