Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1h03
         (726 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113524-1|AAI13525.1|  578|Homo sapiens IFT74 protein protein.        33   0.79 
BC107742-1|AAI07743.1|  372|Homo sapiens IFT74 protein protein.        33   0.79 
BC023634-1|AAH23634.2|  383|Homo sapiens IFT74 protein protein.        33   0.79 
AY040325-1|AAK77221.1|  600|Homo sapiens capillary morphogenesis...    33   0.79 
AL356133-4|CAH72643.1|  600|Homo sapiens intraflagellar transpor...    33   0.79 
AK023707-1|BAB14650.1|  435|Homo sapiens protein ( Homo sapiens ...    33   0.79 
BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein pr...    31   5.6  
BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6 p...    31   5.6  
BC033524-1|AAH33524.1|  396|Homo sapiens RBM27 protein protein.        31   5.6  
AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6 p...    31   5.6  
AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein...    31   5.6  
AB037732-1|BAA92549.1|  889|Homo sapiens KIAA1311 protein protein.     31   5.6  

>BC113524-1|AAI13525.1|  578|Homo sapiens IFT74 protein protein.
          Length = 578

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +3

Query: 489 NNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKD 668
           N K +S+  ++     ++     + +   +ES  +Q I   K+    + E E L+KQ+KD
Sbjct: 233 NMKKESLEAEIAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKD 292

Query: 669 D-IEVLSKNADKQSTKE 716
           D  E+ S       TKE
Sbjct: 293 DNQEIASMERQLTDTKE 309


>BC107742-1|AAI07743.1|  372|Homo sapiens IFT74 protein protein.
          Length = 372

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +3

Query: 489 NNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKD 668
           N K +S+  ++     ++     + +   +ES  +Q I   K+    + E E L+KQ+KD
Sbjct: 255 NMKKESLEAEIAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKD 314

Query: 669 D-IEVLSKNADKQSTKE 716
           D  E+ S       TKE
Sbjct: 315 DNQEIASMERQLTDTKE 331


>BC023634-1|AAH23634.2|  383|Homo sapiens IFT74 protein protein.
          Length = 383

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +3

Query: 489 NNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKD 668
           N K +S+  ++     ++     + +   +ES  +Q I   K+    + E E L+KQ+KD
Sbjct: 135 NMKKESLEAEIAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKD 194

Query: 669 D-IEVLSKNADKQSTKE 716
           D  E+ S       TKE
Sbjct: 195 DNQEIASMERQLTDTKE 211


>AY040325-1|AAK77221.1|  600|Homo sapiens capillary morphogenesis
           protein-1 protein.
          Length = 600

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +3

Query: 489 NNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKD 668
           N K +S+  ++     ++     + +   +ES  +Q I   K+    + E E L+KQ+KD
Sbjct: 255 NMKKESLEAEIAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKD 314

Query: 669 D-IEVLSKNADKQSTKE 716
           D  E+ S       TKE
Sbjct: 315 DNQEIASMERQLTDTKE 331


>AL356133-4|CAH72643.1|  600|Homo sapiens intraflagellar transport
           74 homolog (Chlamydomonas) protein.
          Length = 600

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +3

Query: 489 NNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKD 668
           N K +S+  ++     ++     + +   +ES  +Q I   K+    + E E L+KQ+KD
Sbjct: 255 NMKKESLEAEIAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKD 314

Query: 669 D-IEVLSKNADKQSTKE 716
           D  E+ S       TKE
Sbjct: 315 DNQEIASMERQLTDTKE 331


>AK023707-1|BAB14650.1|  435|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13645 fis, clone PLACE1011310, weakly similar to
           MYOSIN HEAVY CHAIN, GIZZARD SMOOTH MUSCLE. ).
          Length = 435

 Score = 33.5 bits (73), Expect = 0.79
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
 Frame = +3

Query: 489 NNKIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKD 668
           N K +S+  ++     ++     + +   +ES  +Q I   K+    + E E L+KQ+KD
Sbjct: 90  NMKKESLEAEIAHSQVKQEAVLLHEKLYELESHRDQMIAEDKSIGSPMEEREKLLKQIKD 149

Query: 669 D-IEVLSKNADKQSTKE 716
           D  E+ S       TKE
Sbjct: 150 DNQEIASMERQLTDTKE 166


>BX537405-1|CAD97647.1| 1109|Homo sapiens hypothetical protein
           protein.
          Length = 1109

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +3

Query: 375 TKIRPLRRTAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGEC 554
           T I  L RT E   N+RVQ   A+ L + ++   K+++   +DSM++ +      +  E 
Sbjct: 453 TVIAALLRTMENQGNQRVQSHAASALIIFIEDCPKSLLVLYVDSMVKNLHSVLVIKLQEL 512

Query: 555 ANTRT-LSVESTV 590
               T L++E  V
Sbjct: 513 IRNGTKLALEQLV 525


>BC098406-1|AAH98406.1| 1105|Homo sapiens RAN binding protein 6
           protein.
          Length = 1105

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +3

Query: 375 TKIRPLRRTAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGEC 554
           T I  L RT E   N+RVQ   A+ L + ++   K+++   +DSM++ +      +  E 
Sbjct: 449 TVIAALLRTMENQGNQRVQSHAASALIIFIEDCPKSLLVLYVDSMVKNLHSVLVIKLQEL 508

Query: 555 ANTRT-LSVESTV 590
               T L++E  V
Sbjct: 509 IRNGTKLALEQLV 521


>BC033524-1|AAH33524.1|  396|Homo sapiens RBM27 protein protein.
          Length = 396

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 20/76 (26%), Positives = 31/76 (40%)
 Frame = +3

Query: 495 KIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDI 674
           K+   + K R +  ++  EC       +E     + E   N  K L EL   I QLKD++
Sbjct: 157 KLQQDMRKKRQEVLEKQIECQKMLISKLEKNKNMKPEERANIMKTLKELGEKISQLKDEL 216

Query: 675 EVLSKNADKQSTKEIT 722
           +  S  +     K  T
Sbjct: 217 KTSSAVSTPSKVKTKT 232


>AL162384-1|CAI12713.1| 1105|Homo sapiens RAN binding protein 6
           protein.
          Length = 1105

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +3

Query: 375 TKIRPLRRTAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGEC 554
           T I  L RT E   N+RVQ   A+ L + ++   K+++   +DSM++ +      +  E 
Sbjct: 449 TVIAALLRTMENQGNQRVQSHAASALIIFIEDCPKSLLVLYVDSMVKNLHSVLVIKLQEL 508

Query: 555 ANTRT-LSVESTV 590
               T L++E  V
Sbjct: 509 IRNGTKLALEQLV 521


>AF039023-1|AAC14260.1| 1105|Homo sapiens Ran-GTP binding protein
           protein.
          Length = 1105

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
 Frame = +3

Query: 375 TKIRPLRRTAEETENRRVQKTKATVLRVTMDRILKTVINNKIDSMIEKVRDKFCQEFGEC 554
           T I  L RT E   N+RVQ   A+ L + ++   K+++   +DSM++ +      +  E 
Sbjct: 449 TVIAALLRTMENQGNQRVQSHAASALIIFIEDCPKSLLVLYVDSMVKNLHSVLVIKLQEL 508

Query: 555 ANTRT-LSVESTV 590
               T L++E  V
Sbjct: 509 IRNGTKLALEQLV 521


>AB037732-1|BAA92549.1|  889|Homo sapiens KIAA1311 protein protein.
          Length = 889

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 20/76 (26%), Positives = 31/76 (40%)
 Frame = +3

Query: 495 KIDSMIEKVRDKFCQEFGECANTRTLSVESTVEQQIESSKNFDKHLNELETLIKQLKDDI 674
           K+   + K R +  ++  EC       +E     + E   N  K L EL   I QLKD++
Sbjct: 650 KLQQDMRKKRQEVLEKQIECQKMLISKLEKNKNMKPEERANIMKTLKELGEKISQLKDEL 709

Query: 675 EVLSKNADKQSTKEIT 722
           +  S  +     K  T
Sbjct: 710 KTSSAVSTPSKVKTKT 725


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,383,265
Number of Sequences: 237096
Number of extensions: 2019745
Number of successful extensions: 6147
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6147
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)