Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1h02
(714 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces pomb... 56 5e-09
SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr 3... 47 2e-06
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 31 0.16
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 29 0.66
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 29 0.87
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.0
SPBC9B6.06 |mrpl10||mitochondrial ribosomal protein subunit L15|... 27 2.0
SPAC13F5.06c |sec10||exocyst complex subunit Sec10|Schizosacchar... 27 3.5
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 26 4.7
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni... 26 4.7
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 26 4.7
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 26 6.1
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 25 8.1
>SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 56.0 bits (129), Expect = 5e-09
Identities = 42/132 (31%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Frame = +2
Query: 182 GVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDL-PEQLTV 358
G PGAG T A I G + G++ R + R T G+ A+KI L + +
Sbjct: 10 GPPGAGKGTQAPNIQKKYGIAHLATGDMLRSQVARQTELGKE-AKKIMDQGGLVSDDIVT 68
Query: 359 DLIKEEMLSQPEAK-GFILVGFPRN----SRMSDIFSRQVKWPEKVVALEVDNEVAAARL 523
+IK+E+L+ PE K GFIL GFPR +++ + V+ L+VD+E+ R+
Sbjct: 69 GMIKDEILNNPECKNGFILDGFPRTVVQAEKLTALLDELKLDLNTVLELQVDDELLVRRI 128
Query: 524 QNKLSELGRPES 559
+L G S
Sbjct: 129 TGRLVHPGSGRS 140
>SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 191
Score = 47.2 bits (107), Expect = 2e-06
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Frame = +2
Query: 167 VIFVNGVPGAGNQTVAETISD-ITGYNMIRPGELERVEATRDTVR-GRMVAEKIRTLEDL 340
VIFV G PGAG T + +++ + I G+ R E R + G ++ E I+ + +
Sbjct: 4 VIFVLGGPGAGKGTQCDRLAEKFDKFVHISAGDCLREEQNRPGSKYGNLIKEYIKDGKIV 63
Query: 341 PEQLTVDLIKEEMLSQPEAKG---FILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEVA 511
P ++T+ L++ +M + KG F++ GFPR + F + V + + E
Sbjct: 64 PMEITISLLETKM-KECHDKGIDKFLIDGFPREMDQCEGFEKSVCPAKFALYFRCGQETM 122
Query: 512 AARLQNKLSELGRPESEINAARQ 580
RL ++ GR + I + ++
Sbjct: 123 LKRLIHRGKTSGRSDDNIESIKK 145
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 31.1 bits (67), Expect = 0.16
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 155 RRLPVIFVNGVPGAGNQTVAETISDITGYNMIRPGEL 265
R LP I + G PG G T+AE +++ T I G++
Sbjct: 6 RELPNIIICGTPGTGKTTLAEQVAETTELENICIGDV 42
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 29.1 bits (62), Expect = 0.66
Identities = 22/85 (25%), Positives = 44/85 (51%)
Frame = +2
Query: 320 IRTLEDLPEQLTVDLIKEEMLSQPEAKGFILVGFPRNSRMSDIFSRQVKWPEKVVALEVD 499
+ TL LP+ + +D ++EMLS+ A+ G + ++ D +Q++ ++ L+
Sbjct: 143 LETLPALPDAIDMDEDEKEMLSEARARLANTQG--KKAKRKD-REKQLELTRRLSHLQKR 199
Query: 500 NEVAAARLQNKLSELGRPESEINAA 574
E+ AA + KL + E + NA+
Sbjct: 200 RELKAAGINIKLFRRKKNEMDYNAS 224
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 28.7 bits (61), Expect = 0.87
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 113 DIEVVEDLYDMSPVRRLPVIFVNGVPGAGNQTVAETISDITGYNMIRPG 259
D+ + + D S VRR P FVNGV N I D++G ++ G
Sbjct: 430 DVVLKGSIPDTSSVRRNPPCFVNGVESI-NVDFEARIFDVSGDRLVLAG 477
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 2.0
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Frame = +2
Query: 353 TVDLIKEEMLSQPEAKGFILVG--FPRNSRMSDIFSRQVKWPEKVVALEVDNEVAAARLQ 526
TV + +E P LV S + + S+ ++ EKV ALE D E+ +Q
Sbjct: 512 TVQVALDEYAQNPSTASETLVNKELANFSSIKEAVSKTLELREKVRALECDVEIQKQTVQ 571
Query: 527 NKLSELGRPESEINAARQIIRDAAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEILS 703
++S NA ++ + ++KN++ + +S N L LKE+L+
Sbjct: 572 YQIS---------NAVKENSNTLSEQIKNLESELNSSKIKNESLLNERNL---LKEMLA 618
>SPBC9B6.06 |mrpl10||mitochondrial ribosomal protein subunit
L15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 220
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 235 RLQHDPAGRTGKS--RGYKGHGQRENGRRKDSNARGST 342
R+ PA GK+ RG+KG GQR R K G T
Sbjct: 16 RVGRGPASGLGKTSGRGHKGSGQRRGRRIKPGFEGGQT 53
>SPAC13F5.06c |sec10||exocyst complex subunit
Sec10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 811
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 308 VAEKIRTLEDLPEQLTVDLIKEEMLSQPEA 397
+ E +R DLPE L + L KEE L P++
Sbjct: 781 IHEVLRLRFDLPENLKLQLNKEEALLPPKS 810
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 4.7
Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 11/178 (6%)
Frame = +2
Query: 197 GNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKI--RTLEDLPEQLTV---D 361
G QT+ + T YN++R ELE R ++++ ++ D+ + T +
Sbjct: 125 GKQTLFGRVVGDTIYNVVRISELELDANQRPVFPPKIISTEVIDNYFTDIKPRSTKEERE 184
Query: 362 LIKEEMLSQPEAK--GFILVGFPRNSRMSDIFSRQVKWPEKVVALEVDNEVAAARLQNKL 535
I E+ Q + K +L RN + F +V P +V + + +R +
Sbjct: 185 KIANELAHQEKQKERNKLLKSGRRNKAVLS-FGDEVDMP--IVKKPLRQKTPVSRSSDTT 241
Query: 536 SELGR----PESEINAARQIIRDAAHKVKNVQKRFARHVVTVDSTDNRTALASTLKEI 697
+EL + S I++ + K +AR V T+D+ N ++ + +EI
Sbjct: 242 TELSKDLISSSSSIHSTYSSAQTGLTSAKVSSDEYARQVDTLDTKLNSSSKSKVQEEI 299
>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 960
Score = 26.2 bits (55), Expect = 4.7
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +2
Query: 167 VIFVNGVPGAGNQTVAETISDITGYNMIRPGELERVEATRDTVRGRMVAEKIRTLEDLPE 346
++ + G+ GAG T+A I+ GY ++ + + T TV + V+ I L
Sbjct: 418 IMMLTGLAGAGKTTLAHVIAHQAGYKVLEINASD--DRTAHTVHEK-VSSAISNHSALSS 474
Query: 347 QLTVDLIKE 373
Q T ++ E
Sbjct: 475 QPTCVIVDE 483
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 26.2 bits (55), Expect = 4.7
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +2
Query: 170 IFVNGVPGAGNQTVAETISDITGYNMI 250
+ ++G PG G T A ++ + GY+++
Sbjct: 412 VLLSGPPGIGKTTAAHLVAKLEGYDVL 438
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 25.8 bits (54), Expect = 6.1
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 494 VDNEVAAARLQNKLSELGRPESEINAARQIIRDAAHKVKNV-QKRFARHVVTVDSTDNRT 670
+DN A + +++EL R +E+N R I + + + + K F + +V + +
Sbjct: 216 IDNVSANEMERREIAELARETTELNELRSSIGQSDNGFEKIFTKMFTKDIVRLREVPDAW 275
Query: 671 ALASTLKEI 697
S KE+
Sbjct: 276 TYRSPPKEL 284
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +2
Query: 491 EVDNEVAAARLQNKLSELGRPESEINAARQIIRDAAHKVKNVQKR 625
EVD E +LQN+L EL E++ A+ ++ + ++ ++++
Sbjct: 280 EVDYEYEIRQLQNRLDEL---SEELDVAQDLLTEKEDEIATLKRQ 321
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,779,981
Number of Sequences: 5004
Number of extensions: 55905
Number of successful extensions: 184
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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