Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1g22
(699 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0165 - 14758453-14758752,14759991-14760770 33 0.29
03_02_0952 + 12666750-12666777,12666965-12667185,12669464-126696... 31 0.67
07_03_0631 + 20104332-20106802,20106904-20107030,20107352-201074... 31 1.2
01_05_0496 + 22728097-22728401,22728506-22728670,22728771-22729041 29 2.7
12_02_0185 + 15050613-15051320,15055443-15055742 29 3.5
08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767 29 4.7
04_03_0864 + 20401025-20401810 29 4.7
02_04_0444 - 22974979-22975251,22975338-22975379,22975471-229754... 29 4.7
12_01_1073 + 11135853-11137388,11137627-11137846,11137990-111381... 28 6.2
02_04_0631 - 24611729-24612183,24612467-24612629,24612649-24612870 28 6.2
07_01_0363 - 2675951-2676049,2676146-2676279,2676362-2676395,267... 28 8.2
05_03_0125 + 8738770-8739237,8739266-8739742 28 8.2
04_04_0294 + 24204563-24204748,24205531-24205620,24205980-242062... 28 8.2
04_01_0199 - 2377406-2377573,2377649-2377730,2378006-2378274,237... 28 8.2
02_04_0606 + 24297392-24299241,24299424-24299484,24299626-24300087 28 8.2
02_01_0299 + 2001938-2002510,2002821-2003033,2003129-2003333,200... 28 8.2
01_07_0227 + 42144437-42144446,42145059-42145428,42145528-421456... 28 8.2
>12_02_0165 - 14758453-14758752,14759991-14760770
Length = 359
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +3
Query: 552 ILQSHGARPRKIASLIGIEGGHSIANSLAVLRSYYQLGVRYMTLTH 689
+++ HG R+I+SL+ + GGH A + A+ R++ ++ M L H
Sbjct: 185 VVREHGDVFRRISSLVDVAGGHGTA-AQAIARAFPEVKCSVMDLAH 229
>03_02_0952 +
12666750-12666777,12666965-12667185,12669464-12669649,
12670147-12670212,12670335-12670427,12670528-12670659,
12670794-12670895,12670993-12671070,12671148-12671219,
12672185-12672292,12672368-12672465,12672904-12672964,
12673058-12673120,12673228-12673284,12673571-12673729,
12674310-12674441,12674516-12674602,12674667-12674738,
12675899-12675985,12676052-12676427,12676727-12676788,
12676946-12677014,12677096-12677142,12677189-12677342,
12677874-12677999
Length = 911
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 211 GWRLRSKSWRRSHSLTGITICHGISENSFG 300
GWR R +S R ++SL IT GI+ FG
Sbjct: 70 GWRRRGQSQRSNNSLLHITWAEGINRGKFG 99
>07_03_0631 +
20104332-20106802,20106904-20107030,20107352-20107479,
20108771-20109083
Length = 1012
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -2
Query: 407 HHALSQSRKISVGVLGDR-PGLHHGQVCVQFEVVHLIPKEFSDIPWQIVMPVNEWDLLQD 231
HHA +RK S+ +GD+ G HG + L+ + + W+ V N W+ +D
Sbjct: 324 HHAFGLTRKDSLESIGDKIAGKLHGLPLSAEVIGRLLRTKLDEDHWRNVCESNWWNDYED 383
Query: 230 LL 225
L+
Sbjct: 384 LV 385
>01_05_0496 + 22728097-22728401,22728506-22728670,22728771-22729041
Length = 246
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = +3
Query: 492 IKRLVEKYPQQLQFATSVTDILQSHGARPRKIASLIGIEGGHSIANSLAVLRSYYQLGV 668
+K+ VE+ +F + D + +H A P + + GG+SIA + AV+ + +LG+
Sbjct: 169 VKKRVERARDDARFVVTTYDGVHNHPA-PLHLRPQLPPPGGYSIAGAPAVVAPHGRLGL 226
>12_02_0185 + 15050613-15051320,15055443-15055742
Length = 335
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 552 ILQSHGARPRKIASLIGIEGGHSIANSLAVLRSYYQLGVRYMTLTH 689
+++ HG R I+SL+ + GGH A + A+ ++ ++ + L H
Sbjct: 159 VVREHGEVSRGISSLVDVAGGHGTA-ARAIAEAFPEVRCTVLDLPH 203
>08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767
Length = 1041
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 419 ELSSHHALSQSRKISVGVLGDRPGLHH 339
ELSS H LS ++VG L D G H+
Sbjct: 867 ELSSSHGLSLDLNLAVGALDDTEGSHN 893
>04_03_0864 + 20401025-20401810
Length = 261
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -1
Query: 453 CFG-YRTARTPTRIELPPCPLAVSEDQCGSTWR*TRAPPRSGLCPVRSRSLDSE 295
CFG R+ R+P P P E++ G W A R LC S L+ E
Sbjct: 154 CFGAVRSERSPATAAAAPAPPVEDEERNGGCWASVAATLRH-LCRSSSNPLEGE 206
>02_04_0444 -
22974979-22975251,22975338-22975379,22975471-22975479,
22975783-22975968,22976063-22976299,22982410-22982625,
22982729-22983059,22983410-22983522,22984538-22984647,
22985325-22985439
Length = 543
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 324 DTDLTVVEPWSISKYSHTDLPRLR 395
D DL +V+PW YS D P R
Sbjct: 104 DMDLVMVDPWCAGYYSDADAPNRR 127
>12_01_1073 + 11135853-11137388,11137627-11137846,11137990-11138178,
11138257-11138457,11138547-11139246,11163479-11164106
Length = 1157
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 368 VLGDRPGLHHGQVCVQFEVV 309
V+ P HHGQVC+Q E V
Sbjct: 1083 VVPSLPPTHHGQVCLQLETV 1102
>02_04_0631 - 24611729-24612183,24612467-24612629,24612649-24612870
Length = 279
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 564 HGARPRKIASLIGIEGGHSIANSLAVLRSYYQLGVRYMTLTHTC 695
H ARP+ + S +G H++ L + +GVR T TC
Sbjct: 215 HSARPKPLGSASFYDGRHTLRLLLRMKLELLAVGVRRRLATMTC 258
>07_01_0363 -
2675951-2676049,2676146-2676279,2676362-2676395,
2676485-2676604,2676720-2676836,2676924-2677043,
2677129-2677218,2677313-2677438,2677566-2677619,
2677856-2677936,2678025-2678132,2678218-2678289,
2678885-2678947,2679476-2679646
Length = 462
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -2
Query: 506 DKSLDDVNLLQSQLDGVSVLGTARHERRPE-LSSHHALSQSRKISVGVLGDR 354
D +LDD+N + ++ + L R E RP +++ +S S+ +++G L ++
Sbjct: 281 DVNLDDINSIFNESGDQTQLVVERREERPSVMNAFELISTSQGLNLGTLFEK 332
>05_03_0125 + 8738770-8739237,8739266-8739742
Length = 314
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 453 RDAVQLTLEQIDVIKRLVEKYPQQLQFATS-VTDILQSHGARPRKIASLIGIEGGHSIAN 629
R AV+ L +I V + + P++++ A V+D+ HG R IA+ G H + N
Sbjct: 119 RAAVKRDLVRIGVAMEKLSQTPERIEAADRPVSDLDAKHGEGLRAIAAQEECSGRHGLGN 178
>04_04_0294 +
24204563-24204748,24205531-24205620,24205980-24206211,
24207180-24207457,24207576-24207647,24208054-24208295,
24208781-24209197,24209296-24209497,24209624-24209738,
24209821-24209906,24210235-24210354,24210431-24210519,
24210588-24210669,24211072-24211263,24211546-24211668
Length = 841
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = -2
Query: 527 QLLRVFFDKSLDDVNLLQSQLDG 459
++L V+F K L+++N++ + LDG
Sbjct: 170 EILNVYFKKKLEELNIMMAGLDG 192
>04_01_0199 -
2377406-2377573,2377649-2377730,2378006-2378274,
2379648-2379788,2380891-2381076,2381529-2381765,
2382077-2382292,2382389-2382719,2382842-2382954,
2383288-2383602,2383713-2383840,2385274-2385547
Length = 819
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 324 DTDLTVVEPWSISKYSHTDLPRLR 395
D DL V+PW YS D P R
Sbjct: 268 DMDLVTVDPWCAGYYSDADAPSRR 291
>02_04_0606 + 24297392-24299241,24299424-24299484,24299626-24300087
Length = 790
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 582 KIASLIGIEGGHSIANSLAVLRSYYQLGVRYMTLTHTCH 698
KI S+IGI ++A+S +L + R L H CH
Sbjct: 451 KITSVIGISEEGNVASSQKLLLDRSEFCARLEHLVHVCH 489
>02_01_0299 +
2001938-2002510,2002821-2003033,2003129-2003333,
2003485-2003560,2003665-2003800,2003905-2004009,
2004095-2004172,2004264-2004353,2004441-2004506,
2004836-2004892,2004996-2005073,2005165-2005212,
2005330-2005401
Length = 598
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/65 (30%), Positives = 25/65 (38%)
Frame = +2
Query: 152 GMCAVCNHRGGCSRFLRSRTAGDCEANPGGGPTH*RA*RSAMEYQKIPSESSERLRTGHR 331
G C GG +R A D EA G + RA R+ + + SS L
Sbjct: 30 GSCGFVAAGGGAKTTVRVAAALDTEATAKAGKSSSRARRARKDGGEPGGSSSTALLAPTH 89
Query: 332 PDRGG 346
PD GG
Sbjct: 90 PDGGG 94
>01_07_0227 +
42144437-42144446,42145059-42145428,42145528-42145649,
42145767-42145935,42146236-42146545,42146742-42146825,
42147012-42147083,42147780-42147821,42147931-42148020,
42148106-42148213,42148292-42148384,42148540-42148619,
42148701-42148953,42151222-42151236
Length = 605
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 377 SVGVLGDRPGLHHGQVCVQFEVVHLIPKEFSDIPWQIVMPVNEWD 243
+VGVL D PG + C F + PK +P Q++ N +D
Sbjct: 449 AVGVLTDHPGQAGNEAC-PFHGIPANPKPLLAVPTQVLQLKNVFD 492
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,934,838
Number of Sequences: 37544
Number of extensions: 476689
Number of successful extensions: 1433
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1390
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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