Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1g22
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003740-9|AAC48140.1| 852|Caenorhabditis elegans Hypothetical ... 31 0.79
U14521-1|AAA64269.1| 360|Caenorhabditis elegans ppp-1 protein. 30 1.8
AC006608-3|AAF39757.1| 404|Caenorhabditis elegans Pyrophosphory... 30 1.8
AF025460-5|AAB70988.5| 584|Caenorhabditis elegans Polh (dna pol... 29 2.4
AB244413-1|BAE72703.1| 584|Caenorhabditis elegans DNA polymeras... 29 2.4
Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z77663-17|CAB54256.5| 500|Caenorhabditis elegans Hypothetical p... 28 5.6
U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily ass... 28 5.6
U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily ass... 28 5.6
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 28 5.6
AL021346-4|CAB54259.5| 500|Caenorhabditis elegans Hypothetical ... 28 5.6
AC006720-1|AAF60446.1| 350|Caenorhabditis elegans Hypothetical ... 28 7.4
U29244-18|AAC71099.2| 515|Caenorhabditis elegans Hypothetical p... 27 9.8
>AF003740-9|AAC48140.1| 852|Caenorhabditis elegans Hypothetical
protein C41D11.6 protein.
Length = 852
Score = 31.1 bits (67), Expect = 0.79
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 257 VNEWDLLQDLLRNLQPFAIVGSGCNHRDDCKQRTCHQTSVATI 129
V+E+ L+Q + QPF++VG R K C T + T+
Sbjct: 309 VSEFSLVQRKISEPQPFSLVGRAAGGRHSKKLAVCGVTEIVTV 351
>U14521-1|AAA64269.1| 360|Caenorhabditis elegans ppp-1 protein.
Length = 360
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Frame = +3
Query: 453 RDAVQLTLEQIDVIKRLVEKYPQQLQFAT------SVTDILQSHGARPRKIASLIGIE 608
R+ +QLTLE+ +L+EKYP +++ D+L++H ++ K A ++ +
Sbjct: 57 REVLQLTLEKEVKKSKLLEKYPAHIEYICVNQEDFGTADLLKNHHSKITKDALIVSCD 114
>AC006608-3|AAF39757.1| 404|Caenorhabditis elegans
Pyrophosphorylase family protein 1 protein.
Length = 404
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Frame = +3
Query: 453 RDAVQLTLEQIDVIKRLVEKYPQQLQFAT------SVTDILQSHGARPRKIASLIGIE 608
R+ +QLTLE+ +L+EKYP +++ D+L++H ++ K A ++ +
Sbjct: 57 REVLQLTLEKEVKKSKLLEKYPAHIEYICVNQEDFGTADLLKNHHSKITKDALIVSCD 114
>AF025460-5|AAB70988.5| 584|Caenorhabditis elegans Polh (dna
polymerase eta) homologprotein 1 protein.
Length = 584
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +3
Query: 441 GTQNRDAVQLTL--EQIDV-IKRLVEKYPQQLQFATSVTDILQSHGARPRKIASLIGI 605
G + ++ + +TL E ++V I +L+E +P Q ++ SV + RPRK +S I +
Sbjct: 262 GNRIQEMLNITLMGELLEVDISQLIETFPNQHEYLRSVAEGHCDEPVRPRKESSSIAV 319
>AB244413-1|BAE72703.1| 584|Caenorhabditis elegans DNA polymerase
eta protein.
Length = 584
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +3
Query: 441 GTQNRDAVQLTL--EQIDV-IKRLVEKYPQQLQFATSVTDILQSHGARPRKIASLIGI 605
G + ++ + +TL E ++V I +L+E +P Q ++ SV + RPRK +S I +
Sbjct: 262 GNRIQEMLNITLMGELLEVDISQLIETFPNQHEYLRSVAEGHCDEPVRPRKESSSIAV 319
>Z50874-6|CAA90765.1| 759|Caenorhabditis elegans Hypothetical
protein R10E4.4 protein.
Length = 759
Score = 29.1 bits (62), Expect = 3.2
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Frame = +3
Query: 387 RLREGMVGAQFWSAFVPCGTQNRDAVQLTLEQIDVIKRLVEKYPQQ--LQFATS--VTDI 554
++R +V A AF + A+ +T+ Q++ I R+ E + QFAT V +
Sbjct: 608 KMRNPVVNAD---AFKSGKKAHNSAIPITVRQLEAIVRIAESIAKMELQQFATDKHVEEA 664
Query: 555 LQSHGARPRKIAS---LIGIEGGHSIANSLAVLRSYYQLGVRYMTLTH 689
L+ + A+ L G+EG S A+ A+ R Q+ R+ TH
Sbjct: 665 LRLFRVSTIEAAATGNLAGVEGFTSTADQEALNRIEVQMKKRFAIGTH 712
>Z77663-17|CAB54256.5| 500|Caenorhabditis elegans Hypothetical
protein F53F4.14 protein.
Length = 500
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 534 ATSVTDILQSHGARPRKIAS-LIGIEGGHSIAN 629
A VTD+ G R RKIA+ IG +GG+ N
Sbjct: 297 AEDVTDLFNDRGGRKRKIAAPSIGEDGGNKRIN 329
>U61952-9|AAB03165.1| 1321|Caenorhabditis elegans Temporarily assigned
gene nameprotein 137, isoform b protein.
Length = 1321
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -2
Query: 512 FFDKSLDDVNLLQSQLDGVSVLGTARHERRPELSSHHALSQSRKISVGVLGDRP 351
F +S DD L L GV + T+R L +H ++Q R + + +LGD P
Sbjct: 886 FTVQSFDDRILEVVALFGVIHVATSRVPNAVRLQNHR-IAQCRHVRIVILGDEP 938
>U61952-8|AAB03166.1| 1372|Caenorhabditis elegans Temporarily assigned
gene nameprotein 137, isoform a protein.
Length = 1372
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = -2
Query: 512 FFDKSLDDVNLLQSQLDGVSVLGTARHERRPELSSHHALSQSRKISVGVLGDRP 351
F +S DD L L GV + T+R L +H ++Q R + + +LGD P
Sbjct: 937 FTVQSFDDRILEVVALFGVIHVATSRVPNAVRLQNHR-IAQCRHVRIVILGDEP 989
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 279 NIRKFLRNQVNDFELDTDLTVVEPWSISKYSH 374
N+RKF+ ++V + D T+ PW I K +H
Sbjct: 38 NVRKFVADEVIPVAGEYDKTMEYPWEIIKKAH 69
>AL021346-4|CAB54259.5| 500|Caenorhabditis elegans Hypothetical
protein F53F4.14 protein.
Length = 500
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 534 ATSVTDILQSHGARPRKIAS-LIGIEGGHSIAN 629
A VTD+ G R RKIA+ IG +GG+ N
Sbjct: 297 AEDVTDLFNDRGGRKRKIAAPSIGEDGGNKRIN 329
>AC006720-1|AAF60446.1| 350|Caenorhabditis elegans Hypothetical
protein Y17G9B.5 protein.
Length = 350
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 489 VIKRLVEKYPQQLQFATSVTDILQSHGARPRK 584
V +++ YPQQ A V D ++ HG +P K
Sbjct: 102 VFQKVFLHYPQQQNCAVKVLDEMEWHGVQPDK 133
>U29244-18|AAC71099.2| 515|Caenorhabditis elegans Hypothetical
protein ZK1248.1 protein.
Length = 515
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 270 LPWNIRKFLRNQVNDFELDTDLTV---VEPWSISKYSHTDLPRLREGMV 407
LP NI + + DF +D + V PW + +Y DL +L+ GMV
Sbjct: 23 LPKNIIQEHIKKHADFSVDPCVDFYAHVCPWKVERYFMEDLSKLKAGMV 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,622,678
Number of Sequences: 27780
Number of extensions: 356823
Number of successful extensions: 980
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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