Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1g17
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical pr... 71 6e-13
Z81146-1|CAB03521.2| 341|Caenorhabditis elegans Hypothetical pr... 32 0.46
AL032630-10|CAA21566.1| 396|Caenorhabditis elegans Hypothetical... 30 1.4
AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical... 29 3.2
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical... 29 3.2
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF016671-6|AAK73904.1| 979|Caenorhabditis elegans Adaptin or ad... 29 4.3
AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or ad... 29 4.3
AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical ... 28 5.7
U29244-2|AAC71086.1| 334|Caenorhabditis elegans Hypothetical pr... 28 7.5
AC024090-1|AAF35424.2| 591|Caenorhabditis elegans Hypothetical ... 28 7.5
Z79596-4|CAB01856.2| 554|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z79596-3|CAI79132.1| 561|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical
protein F20D1.2 protein.
Length = 641
Score = 71.3 bits (167), Expect = 6e-13
Identities = 37/135 (27%), Positives = 64/135 (47%)
Frame = +2
Query: 302 WLLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNEEDDKLAVISDVESIITF 481
W+ L N L +D++++L NQ LR+D +K L N+ + ++ES +T
Sbjct: 43 WMRLLGVSMKPNPLDDWDQLYNLNNQCALRNDCRKLANGLKNKRS-----VPELESFLTL 97
Query: 482 YCKSKNTTYTSNNGWIDIXXXXXXXXXXRSDTYNLFERILKLYTPKGCSKNGVPCHILRL 661
YCK + Y + GW+ I + +N+F Y PK + + RL
Sbjct: 98 YCKKRGMDYIKDIGWLTILEKILLLNVPAAHEFNVFFAFTTKYIPKDTRPDAQIFDLFRL 157
Query: 662 ILXYHDPELCSFLDT 706
+L YHDP++ + L++
Sbjct: 158 LLQYHDPQISNHLES 172
>Z81146-1|CAB03521.2| 341|Caenorhabditis elegans Hypothetical
protein K10D11.1 protein.
Length = 341
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 140 TNLNLSCQT-KQMAGDDDDTWLIELESALLDGCTAQEINALTKGKKIPVSLRPDV 301
+NLNL CQT KQ A + +++ LE++L + N G V LRP +
Sbjct: 200 SNLNLLCQTKKQWASTQNAIFVVNLEASLSKDILLVQANRYLTGIDEMVELRPQL 254
>AL032630-10|CAA21566.1| 396|Caenorhabditis elegans Hypothetical
protein Y62H9A.10 protein.
Length = 396
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = -3
Query: 701 PKMNKVLDHGXEVSTLIY---GKVLHFLNSPLVYTILKSFQTNYKYLTVV 561
P +N V + V T IY G + FLN PL +LK+ N K L V+
Sbjct: 8 PPLNYVRNEDLFVITYIYVVFGAITLFLNIPLAIYLLKTTSKNQKELIVI 57
>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
protein Y105E8A.23b protein.
Length = 1156
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +2
Query: 305 LLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNEEDDKLAVISDVESIITFY 484
LL N + + QL +F DL + + D ++KF LG +K+ + D+E +
Sbjct: 196 LLAQNVRISDQQLEVFIGTEDLKSIQKEVDQIRKFYIPLGRNLLEKMRYLEDLELVAPLQ 255
Query: 485 CKSKNTTYTSNNGWID 532
+ Y N +D
Sbjct: 256 GNCSSEEYRMNPFQVD 271
>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
protein Y105E8A.23a protein.
Length = 1138
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +2
Query: 305 LLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNEEDDKLAVISDVESIITFY 484
LL N + + QL +F DL + + D ++KF LG +K+ + D+E +
Sbjct: 196 LLAQNVRISDQQLEVFIGTEDLKSIQKEVDQIRKFYIPLGRNLLEKMRYLEDLELVAPLQ 255
Query: 485 CKSKNTTYTSNNGWID 532
+ Y N +D
Sbjct: 256 GNCSSEEYRMNPFQVD 271
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 554 NLTKVIKYQSNHCLKCKLCSSIC 486
N+TK+IK CL+CK C +IC
Sbjct: 296 NVTKIIKRSGWQCLECKSC-TIC 317
>AF016671-6|AAK73904.1| 979|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform b protein.
Length = 979
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/82 (23%), Positives = 36/82 (43%)
Frame = +2
Query: 281 VSLRPDVWLLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNEEDDKLAVISD 460
V D+ L CL+ +D ++ D ++ + ++ + + VKK +E + E +
Sbjct: 65 VQAHKDIVLRCLDDKDESIRIRSLDLLYGMVSKKNIVEIVKKLMEHVEAAEGSHYR--DE 122
Query: 461 VESIITFYCKSKNTTYTSNNGW 526
+ S I C N Y +N W
Sbjct: 123 LLSRIIGICSWSNYQYITNFEW 144
>AF016671-5|AAB66112.2| 1251|Caenorhabditis elegans Adaptin or
adaptin-related proteinprotein 5, isoform a protein.
Length = 1251
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/82 (23%), Positives = 36/82 (43%)
Frame = +2
Query: 281 VSLRPDVWLLCLNCQDAGNQLLLFDEIFDLPNQNELRDDVKKFVEKLGNEEDDKLAVISD 460
V D+ L CL+ +D ++ D ++ + ++ + + VKK +E + E +
Sbjct: 337 VQAHKDIVLRCLDDKDESIRIRSLDLLYGMVSKKNIVEIVKKLMEHVEAAEGSHYR--DE 394
Query: 461 VESIITFYCKSKNTTYTSNNGW 526
+ S I C N Y +N W
Sbjct: 395 LLSRIIGICSWSNYQYITNFEW 416
>AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical
protein F14F9.4 protein.
Length = 918
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 188 DDTWLIELESALLDGCTAQEIN--ALTKGKKIPVSLRPDVWLLCLNCQ 325
D+ WL+ G Q + A + GK++ SL P+ +L+C NC+
Sbjct: 688 DEKWLLRYAVKNAQGAGDQTLLQVACSCGKEVYSSLLPEEFLICPNCK 735
>U29244-2|AAC71086.1| 334|Caenorhabditis elegans Hypothetical
protein ZK1248.5 protein.
Length = 334
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 389 RDDVKKFVEKLGNEEDDKLAVISDVESII 475
+DD+KKF E GN+ L + D + +I
Sbjct: 52 KDDIKKFKEAWGNDYHQTLTFLKDSDRLI 80
>AC024090-1|AAF35424.2| 591|Caenorhabditis elegans Hypothetical
protein C52E2.5 protein.
Length = 591
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = -3
Query: 269 FLSLMH*FLVRYIHREEQTLVLSTKYHRRLL 177
F SL+ + YI++EE TL+ T+Y++RL+
Sbjct: 35 FESLVKKVNIFYIYKEEDTLLGVTRYNKRLV 65
>Z79596-4|CAB01856.2| 554|Caenorhabditis elegans Hypothetical
protein C02C6.2b protein.
Length = 554
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 140 TNLNLSCQTKQMAGD--DDDTWLIELESALLDG 232
T +N+ C ++ DD++W+ EL + LDG
Sbjct: 388 TKVNIDCSVVELCSSSPDDNSWVQELAAPTLDG 420
>Z79596-3|CAI79132.1| 561|Caenorhabditis elegans Hypothetical
protein C02C6.2a protein.
Length = 561
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 140 TNLNLSCQTKQMAGD--DDDTWLIELESALLDG 232
T +N+ C ++ DD++W+ EL + LDG
Sbjct: 395 TKVNIDCSVVELCSSSPDDNSWVQELAAPTLDG 427
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,091,766
Number of Sequences: 27780
Number of extensions: 302430
Number of successful extensions: 840
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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