Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1g17
(706 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.2
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.1
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.1
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 2.8
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 8.6
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 8.6
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 21 8.6
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 8.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 8.6
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 362 FDLPNQNELRDDVKKFVEKLGNEEDDKLAVISDVESIITFYCKS 493
F +NE +KK +EK N + + V + E + F CK+
Sbjct: 1727 FHCMEKNEAAMKLKKRIEKGANPDLSQKPVSTTEELTVPFVCKA 1770
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3
Query: 212 LVLSTKYHRRLLP 174
L+LST+Y +RLLP
Sbjct: 68 LLLSTRYDKRLLP 80
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3
Query: 212 LVLSTKYHRRLLP 174
L+LST+Y +RLLP
Sbjct: 68 LLLSTRYDKRLLP 80
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3
Query: 212 LVLSTKYHRRLLP 174
L+LST+Y +RLLP
Sbjct: 68 LLLSTRYDKRLLP 80
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.4 bits (48), Expect = 2.1
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3
Query: 212 LVLSTKYHRRLLP 174
L+LST+Y +RLLP
Sbjct: 68 LLLSTRYDKRLLP 80
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.0 bits (47), Expect = 2.8
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 660 NLNIWQGTPFFEQPFGVYNFKILSNKL*VSDRGSFKLNKGNKISIQPLFEV*VVFFDL 487
N+N W TPF E+ G N + K D F GN +S + F + FD+
Sbjct: 68 NVNNWLWTPFIER--GPANRMYIEIKFTTRDCSLF---PGNALSCKETFSLLYYEFDV 120
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 138 DNYNTMELQIVRKIHQNNFVNIE 70
+NYN +K+++N +NIE
Sbjct: 103 NNYNNNYNNNYKKLYKNYIINIE 125
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -2
Query: 138 DNYNTMELQIVRKIHQNNFVNIE 70
+NYN +K+++N +NIE
Sbjct: 103 NNYNNNYNNNYKKLYKNYIINIE 125
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 21.4 bits (43), Expect = 8.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 366 SNISSNKSNWFPAS*QFKHNNHTSGRKLTGIFFPFV 259
S I+S+ + FP HNN + L+ +F+ FV
Sbjct: 7 SVIASDMAVLFPEKIIGLHNNMCTSLNLSNLFWLFV 42
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/25 (28%), Positives = 15/25 (60%)
Frame = -3
Query: 611 YTILKSFQTNYKYLTVVASNLTKVI 537
+ ++ F Y+Y+ V++ + KVI
Sbjct: 363 FILVHGFPLEYEYVLAVSNRIQKVI 387
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 8.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 665 VSTLIYGKVLHFLN 624
V IYG + HF+N
Sbjct: 566 VDAAIYGNISHFIN 579
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,804
Number of Sequences: 438
Number of extensions: 3721
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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