Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1g13
(768 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces pom... 99 6e-22
SPBC16D10.03 |pgp2||metallopeptidase Pgp2|Schizosaccharomyces po... 68 2e-12
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 28 1.7
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 27 3.0
SPAC6C3.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 5.2
SPCC1620.13 |||phosphoglycerate mutase family|Schizosaccharomyce... 26 5.2
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 26 5.2
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 26 6.8
SPAC2C4.08 |||conserved fungal protein|Schizosaccharomyces pombe... 26 6.8
>SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 412
Score = 99.1 bits (236), Expect = 6e-22
Identities = 74/236 (31%), Positives = 113/236 (47%), Gaps = 7/236 (2%)
Frame = +1
Query: 76 CRSAMNTFQKLRPLT----NSKCNSTLIFGIETSCDDTGCXXXXXXXXXXXXSLKSQNLV 243
C + TF R LT + C+ T + + TS + C K +
Sbjct: 26 CWNISKTFLSYRTLTALAIETSCDDTSVSVVRTSDSSSHCQNEIICLNTHRTISKYEAY- 84
Query: 244 HLRNGGIIPDVAQDLHRKYIEPTVTETLLKANLL-MKDISAIAVTVKPGLPLSLAVGMKY 420
GGI P + H+K + + T+ A + D IAVT PG+ LAVG+
Sbjct: 85 ----GGIHPTIVIHEHQKNLAKVIQRTISDAARSGITDFDLIAVTRGPGMIGPLAVGLNT 140
Query: 421 AKHLARVNAKPIIPIHHMEAHALTVRMEHNVNFPYLVLLISGGHCLLAVVQNINKFLLLG 600
AK LA KP++ +HHM+AHAL V++E +++FPYL +L+SGGH +L ++ ++
Sbjct: 141 AKGLAVGLQKPLLAVHHMQAHALAVQLEKSIDFPYLNILVSGGHTMLVYSNSLLNHEIIV 200
Query: 601 KSIDMAPGELFDKIARRMKLRNVPELSTMCGGQAVETAALRATNPEMFNL--PIPL 762
+ D+A G+ DK A K +P + M A+E A N ++L PIPL
Sbjct: 201 TTSDIAVGDYLDKCA---KYLGIPWDNEM-PAAALEQFASPEINSTSYSLKPPIPL 252
>SPBC16D10.03 |pgp2||metallopeptidase Pgp2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 346
Score = 67.7 bits (158), Expect = 2e-12
Identities = 39/138 (28%), Positives = 68/138 (49%)
Frame = +1
Query: 259 GIIPDVAQDLHRKYIEPTVTETLLKANLLMKDISAIAVTVKPGLPLSLAVGMKYAKHLAR 438
G +P HR +I P + + +A + KDI I T PG+ L A+ L+
Sbjct: 47 GFLPSDTAKHHRAWIIPLIKQAFAEAKISFKDIDCICFTKGPGIGAPLNSVALCARMLSL 106
Query: 439 VNAKPIIPIHHMEAHALTVRMEHNVNFPYLVLLISGGHCLLAVVQNINKFLLLGKSIDMA 618
++ KP++ ++H H R P +VL +SGG+ + + + K+ + G+++D+A
Sbjct: 107 IHKKPLVAVNHCIGHIEMGREITGAQNP-VVLYVSGGNTQV-IAYSEKKYRIFGETLDIA 164
Query: 619 PGELFDKIARRMKLRNVP 672
G D+ AR + L N P
Sbjct: 165 IGNCLDRFARIIGLSNAP 182
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -2
Query: 719 NAAVSTACPPHIVESSGTFLSFILLAILSNSSPGAMSILLPRRRNLF 579
NA S I E FLSF L I + SS S+ LP NLF
Sbjct: 16 NAGGSQVTESEIEEEDIEFLSFAALKIGATSSLSNSSLGLPEYSNLF 62
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 257 AELYLMLLKIFIGNILNRQSQKHY 328
AEL+ +L IF+ + LN SQ HY
Sbjct: 77 AELHRILFPIFVHSYLNLLSQDHY 100
>SPAC6C3.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 269
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 64 PGILCRSAMNTFQKLRPLTNSKCNSTLIFGIE 159
P L R M RPL N +CNS L + +E
Sbjct: 14 PADLKRLLMKRNSFRRPLLNMRCNSVLQYSLE 45
>SPCC1620.13 |||phosphoglycerate mutase family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 282
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 686 IVESSGTFLSFILLAILSNSSPGAMSILLP 597
+V S G FL F+L AIL+ + S+++P
Sbjct: 197 VVVSHGIFLPFLLRAILARARTPLPSMIIP 226
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 26.2 bits (55), Expect = 5.2
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = +3
Query: 24 FLQVILKDQNIDDARNTLQKCYEYVSK 104
F ++I K+Q + +QK YE + K
Sbjct: 721 FFEIISKEQEASSQQENIQKAYEIIEK 747
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 220 SLKSQNLVHLRNGGIIPDVAQDLHRKYIEPTVTETLLKANLLMKDISAIAVTVKPGLP 393
+LK L+H IP++ +L+ YIE T +L+ LL + A A+ + LP
Sbjct: 337 NLKVLQLLHEHGLASIPELKHELYMAYIERKTT-SLVCLYLLGVESLAPALRIPTALP 393
>SPAC2C4.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 243
Score = 25.8 bits (54), Expect = 6.8
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1
Query: 232 QNLVHLRNGGIIPDVAQD 285
+N +HLRNG +PD A +
Sbjct: 106 KNFLHLRNGRFVPDEADN 123
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,229,970
Number of Sequences: 5004
Number of extensions: 65900
Number of successful extensions: 146
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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