Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1g07
(697 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY358788-1|AAQ89148.1| 159|Homo sapiens AVLL5809 protein. 73 1e-12
CR456932-1|CAG33213.1| 159|Homo sapiens SDHD protein. 67 5e-11
BT007238-1|AAP35902.1| 159|Homo sapiens succinate dehydrogenase... 67 5e-11
BC071756-1|AAH71756.1| 159|Homo sapiens succinate dehydrogenase... 67 5e-11
BC071755-1|AAH71755.1| 159|Homo sapiens succinate dehydrogenase... 67 5e-11
BC022350-1|AAH22350.1| 159|Homo sapiens succinate dehydrogenase... 67 5e-11
BC015992-1|AAH15992.1| 159|Homo sapiens succinate dehydrogenase... 67 5e-11
BC015188-1|AAH15188.1| 159|Homo sapiens succinate dehydrogenase... 67 5e-11
BC012603-1|AAH12603.1| 159|Homo sapiens succinate dehydrogenase... 67 5e-11
BC009574-1|AAH09574.1| 159|Homo sapiens succinate dehydrogenase... 67 5e-11
BC005263-1|AAH05263.1| 159|Homo sapiens succinate dehydrogenase... 67 5e-11
AB026906-1|BAA81889.1| 159|Homo sapiens small subunit of cytoch... 67 5e-11
AB006202-1|BAA22054.1| 159|Homo sapiens cytochrome b small subu... 67 5e-11
BC070307-1|AAH70307.1| 159|Homo sapiens succinate dehydrogenase... 66 9e-11
BC021222-1|AAH21222.3| 552|Homo sapiens cyclin M2 protein. 32 2.2
AL356608-3|CAI16513.1| 552|Homo sapiens cyclin M2 protein. 32 2.2
AL356608-2|CAI16512.1| 854|Homo sapiens cyclin M2 protein. 32 2.2
AL356608-1|CAI16511.1| 876|Homo sapiens cyclin M2 protein. 32 2.2
AL139817-2|CAI40077.1| 854|Homo sapiens cyclin M2 protein. 32 2.2
AL139817-1|CAI40076.1| 876|Homo sapiens cyclin M2 protein. 32 2.2
AK023479-1|BAB14585.1| 853|Homo sapiens protein ( Homo sapiens ... 32 2.2
AF216962-1|AAF86374.1| 633|Homo sapiens ancient conserved domai... 32 2.2
BX649592-6|CAO03500.1| 1266|Homo sapiens plexin B2 protein. 31 3.0
BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein. 31 3.0
AK023066-1|BAB14386.1| 633|Homo sapiens protein ( Homo sapiens ... 31 3.0
AB075511-1|BAE45757.1| 905|Homo sapiens putative protein produc... 31 3.0
AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein. 31 3.0
AK126180-1|BAC86476.1| 179|Homo sapiens protein ( Homo sapiens ... 30 9.1
>AY358788-1|AAQ89148.1| 159|Homo sapiens AVLL5809 protein.
Length = 159
Score = 72.9 bits (171), Expect = 1e-12
Identities = 36/97 (37%), Positives = 52/97 (53%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ LIP + P + D LA +T HS WG+ +V +Y+ G +P
Sbjct: 66 WTSERVVSVLLLGLIPAGYLNPCSVVDYSLAAALTLHSHWGLGQVVTDYVH----GDTLP 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ RA +WK
Sbjct: 122 KAARAGLLALSALTFAGLCYFNYHDVGICRAVAMLWK 158
>CR456932-1|CAG33213.1| 159|Homo sapiens SDHD protein.
Length = 159
Score = 67.3 bits (157), Expect = 5e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>BT007238-1|AAP35902.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 67.3 bits (157), Expect = 5e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>BC071756-1|AAH71756.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 67.3 bits (157), Expect = 5e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>BC071755-1|AAH71755.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 67.3 bits (157), Expect = 5e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>BC022350-1|AAH22350.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 67.3 bits (157), Expect = 5e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>BC015992-1|AAH15992.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 67.3 bits (157), Expect = 5e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>BC015188-1|AAH15188.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 67.3 bits (157), Expect = 5e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>BC012603-1|AAH12603.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 67.3 bits (157), Expect = 5e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>BC009574-1|AAH09574.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 67.3 bits (157), Expect = 5e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>BC005263-1|AAH05263.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 67.3 bits (157), Expect = 5e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>AB026906-1|BAA81889.1| 159|Homo sapiens small subunit of
cytochrome b of succinate dehydrogenase protein.
Length = 159
Score = 67.3 bits (157), Expect = 5e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>AB006202-1|BAA22054.1| 159|Homo sapiens cytochrome b small subunit
of complex II protein.
Length = 159
Score = 67.3 bits (157), Expect = 5e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSVLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>BC070307-1|AAH70307.1| 159|Homo sapiens succinate dehydrogenase
complex, subunit D, integral membrane protein protein.
Length = 159
Score = 66.5 bits (155), Expect = 9e-11
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +3
Query: 321 WVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIP 500
W ERVVS L+ L+P A + P D LA +T H WG+ +V +Y+ G +
Sbjct: 66 WTSERVVSFLLLGLLPAAYLNPCSAMDYSLAAALTLHGHWGLGQVVTDYVH----GDALQ 121
Query: 501 KIMMLLVYFLTATMLGGLFYLNFNDIGVSRAFWRIWK 611
K + L+A GL Y N++D+G+ +A +WK
Sbjct: 122 KAAKAGLLALSALTFAGLCYFNYHDVGICKAVAMLWK 158
>BC021222-1|AAH21222.3| 552|Homo sapiens cyclin M2 protein.
Length = 552
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 372 ALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIPK 503
+L++ N L ++ L IL+ + G+ A+VV I +++FG ++P+
Sbjct: 318 SLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTIGIVIFGEIVPQ 361
>AL356608-3|CAI16513.1| 552|Homo sapiens cyclin M2 protein.
Length = 552
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 372 ALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIPK 503
+L++ N L ++ L IL+ + G+ A+VV I +++FG ++P+
Sbjct: 318 SLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTIGIVIFGEIVPQ 361
>AL356608-2|CAI16512.1| 854|Homo sapiens cyclin M2 protein.
Length = 854
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 372 ALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIPK 503
+L++ N L ++ L IL+ + G+ A+VV I +++FG ++P+
Sbjct: 318 SLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTIGIVIFGEIVPQ 361
>AL356608-1|CAI16511.1| 876|Homo sapiens cyclin M2 protein.
Length = 876
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 372 ALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIPK 503
+L++ N L ++ L IL+ + G+ A+VV I +++FG ++P+
Sbjct: 318 SLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTIGIVIFGEIVPQ 361
>AL139817-2|CAI40077.1| 854|Homo sapiens cyclin M2 protein.
Length = 854
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 372 ALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIPK 503
+L++ N L ++ L IL+ + G+ A+VV I +++FG ++P+
Sbjct: 318 SLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTIGIVIFGEIVPQ 361
>AL139817-1|CAI40076.1| 876|Homo sapiens cyclin M2 protein.
Length = 876
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 372 ALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIPK 503
+L++ N L ++ L IL+ + G+ A+VV I +++FG ++P+
Sbjct: 318 SLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTIGIVIFGEIVPQ 361
>AK023479-1|BAB14585.1| 853|Homo sapiens protein ( Homo sapiens
cDNA FLJ13417 fis, clone PLACE1001983, weakly similar to
HYPOTHETICAL 46.4 KD PROTEIN IN FFH-GRPE INTERGENIC
REGION. ).
Length = 853
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 372 ALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIPK 503
+L++ N L ++ L IL+ + G+ A+VV I +++FG ++P+
Sbjct: 318 SLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTIGIVIFGEIVPQ 361
>AF216962-1|AAF86374.1| 633|Homo sapiens ancient conserved domain
protein 2 protein.
Length = 633
Score = 31.9 bits (69), Expect = 2.2
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 372 ALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIPK 503
+L++ N L ++ L IL+ + G+ A+VV I +++FG ++P+
Sbjct: 76 SLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTIGIVIFGEIVPQ 119
>BX649592-6|CAO03500.1| 1266|Homo sapiens plexin B2 protein.
Length = 1266
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 312 SRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFW 440
SR WV+ RV V +PL+L++P + ++ I ++ + +W
Sbjct: 607 SREWVLGRVEYDTRVSDVPLSLILPLVIVPMVVVIAVSVYCYW 649
>BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein.
Length = 1838
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 312 SRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFW 440
SR WV+ RV V +PL+L++P + ++ I ++ + +W
Sbjct: 1179 SREWVLGRVEYDTRVSDVPLSLILPLVIVPMVVVIAVSVYCYW 1221
>AK023066-1|BAB14386.1| 633|Homo sapiens protein ( Homo sapiens
cDNA FLJ13004 fis, clone NT2RP3000439, weakly similar to
HYPOTHETICAL 46.4 KD PROTEIN IN FFH-GRPE INTERGENIC
REGION. ).
Length = 633
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/44 (31%), Positives = 29/44 (65%)
Frame = +3
Query: 372 ALMMPNKLFDSLLAILITAHSFWGMEAMVVEYIRVLLFGHVIPK 503
+L++ N L ++ L IL+ + G+ A+VV I +++FG ++P+
Sbjct: 76 SLLLGNVLVNTTLTILLDDIAGSGLVAVVVSTIGIVVFGEIVPQ 119
>AB075511-1|BAE45757.1| 905|Homo sapiens putative protein product
of Nbla00445 protein.
Length = 905
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 312 SRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFW 440
SR WV+ RV V +PL+L++P + ++ I ++ + +W
Sbjct: 246 SREWVLGRVEYDTRVSDVPLSLILPLVIVPMVVVIAVSVYCYW 288
>AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein.
Length = 1841
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 312 SRLWVIERVVSAALVPLIPLALMMPNKLFDSLLAILITAHSFW 440
SR WV+ RV V +PL+L++P + ++ I ++ + +W
Sbjct: 1182 SREWVLGRVEYDTRVSDVPLSLILPLVIVPMVVVIAVSVYCYW 1224
>AK126180-1|BAC86476.1| 179|Homo sapiens protein ( Homo sapiens
cDNA FLJ44192 fis, clone THYMU2039780. ).
Length = 179
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 305 GPLQALGH*ESGFCCTGPIDSVSP 376
GP A GH SG CC P+ SV P
Sbjct: 2 GPAAAPGHLSSGGCCVLPLPSVLP 25
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,714,008
Number of Sequences: 237096
Number of extensions: 2397374
Number of successful extensions: 9494
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 9279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9476
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -