Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1f23
(529 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79756-10|CAL36507.1| 80|Caenorhabditis elegans Hypothetical p... 36 0.014
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 33 0.13
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 6.3
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 27 6.3
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 27 6.3
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 27 6.3
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 27 6.3
U80846-2|AAC70887.3| 516|Caenorhabditis elegans Hypothetical pr... 27 8.3
AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical ... 27 8.3
>Z79756-10|CAL36507.1| 80|Caenorhabditis elegans Hypothetical
protein F53C11.9 protein.
Length = 80
Score = 36.3 bits (80), Expect = 0.014
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 178 DANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDAC 321
D + RTC+NP M +RC+C V+D T C+DL C
Sbjct: 31 DCGSPCDRTCENPN--PMCIQMCKARCECKQGFVVDSNTKKCIDLKKC 76
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 202 TCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDAC 321
TCDN E C + C C LV D TG CV+ + C
Sbjct: 93 TCDNENP-ECDLVCMTNVCQCKKGLVRDSATGKCVEKNKC 131
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/67 (23%), Positives = 29/67 (43%)
Frame = +1
Query: 124 KRCVSYCPRLMHPYHTRCDANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLC 303
K+C + R C + +C + +IY + S C+C ++E+ C
Sbjct: 1662 KKCTNPLERSCEDVEKFC--GRVDHVSCLSVRIYNGSLS---SVCECEPGFRFEKESNSC 1716
Query: 304 VDLDACQ 324
VD+D C+
Sbjct: 1717 VDIDECE 1723
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.5 bits (58), Expect = 6.3
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +1
Query: 154 MHPYHT-RCDANTISQRTCDN--PQIYEMGYTCGWSRCDCNGD---LVLDEETGLCVDLD 315
+ PY T CD T D P Y + + G+ C C+ ++LD G CVD D
Sbjct: 854 IQPYDTFECDCTT-DPNFIDPCLPHGYYVQHN-GFYSCQCDVGYKYVLLDSNVGKCVDRD 911
Query: 316 ACQLKN 333
C+ K+
Sbjct: 912 ECEEKS 917
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +1
Query: 235 YTCGWSRC---DCNGDLVLDEETGLCVDLDACQ 324
+TC R DC GDLV ++ TG C + C+
Sbjct: 451 FTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 242 VDGLDVIAMVIWY*TKKQDFVLTWTLANLKMSNLKNLNQESLT 370
VDG+D+ A ++ Q W LA++K NL Q +LT
Sbjct: 313 VDGMDMRAPMMTTGLSAQILAHVWALADIKKCGQLNLEQFALT 355
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 242 VDGLDVIAMVIWY*TKKQDFVLTWTLANLKMSNLKNLNQESLT 370
VDG+D+ A ++ Q W LA++K NL Q +LT
Sbjct: 313 VDGMDMRAPMMTTGLSAQILAHVWALADIKKCGQLNLEQFALT 355
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 242 VDGLDVIAMVIWY*TKKQDFVLTWTLANLKMSNLKNLNQESLT 370
VDG+D+ A ++ Q W LA++K NL Q +LT
Sbjct: 358 VDGMDMRAPMMTTGLSAQILAHVWALADIKKCGQLNLEQFALT 400
>U80846-2|AAC70887.3| 516|Caenorhabditis elegans Hypothetical
protein K06A9.2 protein.
Length = 516
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 172 RCDANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDACQLKN 333
R A+ + C P + Y G ++ +G++V + + +C+DLD LKN
Sbjct: 378 RTGASLVDSSMCLTPDNKYL-YVTGTTKRSVDGEIVFEVKP-ICLDLDTMVLKN 429
>AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical
protein F32B5.7 protein.
Length = 792
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -1
Query: 289 LRLVPNHHCNHI*TIHMYNPFRKFVDCRKSFEKLCSHHIL-CDTDASNVDSTIR 131
L ++P + + HM +P DC K K+ H +L D DS++R
Sbjct: 108 LNVIPPLDVHWVWHTHMLSPIHYQEDCEKLVGKIIDHKLLSSDEIQKRYDSSVR 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,002,859
Number of Sequences: 27780
Number of extensions: 246500
Number of successful extensions: 683
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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