Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1f22
         (672 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0445 + 17989438-17990895                                         30   1.5  
05_07_0106 + 27723877-27723978,27724825-27725100,27726103-27727281     29   3.4  
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281...    29   3.4  
07_03_0796 + 21572131-21572204,21573427-21573482,21573580-215736...    28   5.9  
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165...    28   7.8  
11_01_0218 - 1704459-1704629,1704895-1705119,1705120-1705277,170...    28   7.8  
05_05_0149 - 22733703-22736216                                         28   7.8  
05_04_0307 + 20066169-20066410,20066803-20066858,20067490-200675...    28   7.8  

>10_08_0445 + 17989438-17990895
          Length = 485

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 658 AARKPVSIEDVWRFRPSNY*REPPRPAHQEASVSLSLSLDTALP 527
           A +KPV +ED WR  PS++  E P    + A ++L+    T  P
Sbjct: 295 AVKKPVVVEDPWRPPPSSWTIEAPADGDKWA-ITLATDFSTPKP 337


>05_07_0106 + 27723877-27723978,27724825-27725100,27726103-27727281
          Length = 518

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 592 PPRPAHQEASVSLSLSLDTALPSWIRNLPRQQFHDN 485
           P RPA    S +  LS D A  S+ + L R+ F DN
Sbjct: 4   PARPAAASVSGAFGLSADPARCSFDQTLRREDFQDN 39


>03_01_0360 +
           2815067-2816033,2816120-2816198,2816275-2816342,
           2817382-2817464,2821566-2823083
          Length = 904

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -3

Query: 592 PPRPAHQEASVSLSLSLDTALPSWIRNLPR 503
           PP+P    AS S S   D A+P+W+R LPR
Sbjct: 2   PPQPP-PAASASASAP-DPAVPAWLRGLPR 29


>07_03_0796 +
           21572131-21572204,21573427-21573482,21573580-21573671,
           21574103-21574205,21574297-21574434,21574654-21574907
          Length = 238

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +1

Query: 322 GRNLNIEFRSIVDNFLIRLGIWHILPNSEIKDVADLKTNNTFHELK 459
           G  L+  FR +VDNFL  +G W  +    + +  D++   T H+LK
Sbjct: 198 GLKLSPWFRLVVDNFL--MGWWDHVEKGTLNEAVDME---TIHKLK 238


>12_01_0220 -
           1657554-1657620,1657943-1658109,1658110-1658267,
           1658362-1658447,1658559-1658808,1659194-1660320,
           1662207-1662351,1663555-1663696,1663775-1663828,
           1663914-1663985,1664710-1664778,1664885-1664926,
           1665024-1665092,1665257-1665394,1665518-1665628,
           1665704-1665836,1666834-1666889,1667191-1667901
          Length = 1198

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 28/74 (37%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
 Frame = +2

Query: 305 VAALHAGETSTLSSVRSWTIFSSD*ESGIYCRTLKLRTSLISKPII----PF-MSLRI-- 463
           V  L+   T   +SVR W IFS D  SGI          L+S   I    PF M+LR   
Sbjct: 624 VVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFISTNNPFAMNLRFLA 683

Query: 464 AGILSYCIVMELLS 505
           A  L   IV+ LL+
Sbjct: 684 ADTLQKLIVLALLA 697


>11_01_0218 -
           1704459-1704629,1704895-1705119,1705120-1705277,
           1705378-1705463,1705574-1705823,1706220-1707246
          Length = 638

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 28/74 (37%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
 Frame = +2

Query: 305 VAALHAGETSTLSSVRSWTIFSSD*ESGIYCRTLKLRTSLISKPII----PF-MSLRI-- 463
           V  L+   T   +SVR W IFS D  SGI          L+S   I    PF M+LR   
Sbjct: 14  VVPLYVAMTLAYASVRWWRIFSPDQCSGINRFVALFAVPLLSFHFISTNNPFAMNLRFLA 73

Query: 464 AGILSYCIVMELLS 505
           A  L   IV+ LL+
Sbjct: 74  ADTLQKLIVLALLA 87


>05_05_0149 - 22733703-22736216
          Length = 837

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -2

Query: 413 LISEFGSICQIPNLMRKLSTIERNSMLRFLPHVTLQLDG 297
           L + F S+C I   + K++T++++  + F P    +L G
Sbjct: 699 LENRFSSLCGIQEEISKIATLDKSDEVHFTPFQAAKLQG 737


>05_04_0307 +
           20066169-20066410,20066803-20066858,20067490-20067581,
           20068400-20068502,20068623-20068760,20068898-20069148
          Length = 293

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 322 GRNLNIEFRSIVDNFLIRLGIWHILPNSEIKDVADLKT 435
           G  L+  FR +VDNFL+R   W  +    +++  D+KT
Sbjct: 254 GIKLSPWFRLVVDNFLMRW--WDHVEQGTLEEAIDMKT 289


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,029,609
Number of Sequences: 37544
Number of extensions: 316780
Number of successful extensions: 994
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 994
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)