Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1f18
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical p... 29 2.6
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 2.6
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 2.6
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.6
AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode asta... 29 3.4
Z81134-5|CAB54316.1| 101|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z66519-6|CAA91374.3| 394|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC087079-8|AAK27871.1| 88|Caenorhabditis elegans Hypothetical ... 28 7.9
AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z70307-10|CAA94328.1| 276|Caenorhabditis elegans Hypothetical
protein C39E9.9 protein.
Length = 276
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +2
Query: 143 PNLPHVGGDGETSGLADTPKLSGQELAFYQACMQHTRPPDCRCPQYSGGEM-PQLPPGKE 319
P P GD +G A P G + + + + RPP RCP G P PG++
Sbjct: 91 PGEPGAPGDDGWNGDAGQP---GPDFPLFDQSLIYQRPPCIRCPVGEPGPPGPDGEPGEQ 147
Query: 320 G 322
G
Sbjct: 148 G 148
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.5 bits (63), Expect = 2.6
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 5/144 (3%)
Frame = +2
Query: 290 EMPQLPPGKEGGWSRN---EIMGPLLDPKLYPVRVAASPETPTSRYDQPNAFLDKLQSKY 460
E P+ P K+ ++ EI P+ K P +V P +PT + P +
Sbjct: 1537 EKPKSPTKKDKSPEKSITEEIKSPVKKEKS-PEKVEEKPASPTKKEKSPEKPASPTKKSE 1595
Query: 461 PMLYSILQNEASPE--LKQRIDRDRNKTTYRVDYCETGPGAKFEGLQRAADDSGSGPCAQ 634
+ S + E SPE + + + + K+ + D P K +++ + S +
Sbjct: 1596 NEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKK----EKSPEKSATEDVKS 1651
Query: 635 PMRLPGDPCRVGPKPRMTTPRTMS 706
P + P +V KP T + S
Sbjct: 1652 PTKKEKSPEKVEEKPTSPTKKESS 1675
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.5 bits (63), Expect = 2.6
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 5/144 (3%)
Frame = +2
Query: 290 EMPQLPPGKEGGWSRN---EIMGPLLDPKLYPVRVAASPETPTSRYDQPNAFLDKLQSKY 460
E P+ P K+ ++ EI P+ K P +V P +PT + P +
Sbjct: 1537 EKPKSPTKKDKSPEKSITEEIKSPVKKEKS-PEKVEEKPASPTKKEKSPEKPASPTKKSE 1595
Query: 461 PMLYSILQNEASPE--LKQRIDRDRNKTTYRVDYCETGPGAKFEGLQRAADDSGSGPCAQ 634
+ S + E SPE + + + + K+ + D P K +++ + S +
Sbjct: 1596 NEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKK----EKSPEKSATEDVKS 1651
Query: 635 PMRLPGDPCRVGPKPRMTTPRTMS 706
P + P +V KP T + S
Sbjct: 1652 PTKKEKSPEKVEEKPTSPTKKESS 1675
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.5 bits (63), Expect = 2.6
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 5/144 (3%)
Frame = +2
Query: 290 EMPQLPPGKEGGWSRN---EIMGPLLDPKLYPVRVAASPETPTSRYDQPNAFLDKLQSKY 460
E P+ P K+ ++ EI P+ K P +V P +PT + P +
Sbjct: 1537 EKPKSPTKKDKSPEKSITEEIKSPVKKEKS-PEKVEEKPASPTKKEKSPEKPASPTKKSE 1595
Query: 461 PMLYSILQNEASPE--LKQRIDRDRNKTTYRVDYCETGPGAKFEGLQRAADDSGSGPCAQ 634
+ S + E SPE + + + + K+ + D P K +++ + S +
Sbjct: 1596 NEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKK----EKSPEKSATEDVKS 1651
Query: 635 PMRLPGDPCRVGPKPRMTTPRTMS 706
P + P +V KP T + S
Sbjct: 1652 PTKKEKSPEKVEEKPTSPTKKESS 1675
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.5 bits (63), Expect = 2.6
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 5/144 (3%)
Frame = +2
Query: 290 EMPQLPPGKEGGWSRN---EIMGPLLDPKLYPVRVAASPETPTSRYDQPNAFLDKLQSKY 460
E P+ P K+ ++ EI P+ K P +V P +PT + P +
Sbjct: 1537 EKPKSPTKKDKSPEKSITEEIKSPVKKEKS-PEKVEEKPASPTKKEKSPEKPASPTKKSE 1595
Query: 461 PMLYSILQNEASPE--LKQRIDRDRNKTTYRVDYCETGPGAKFEGLQRAADDSGSGPCAQ 634
+ S + E SPE + + + + K+ + D P K +++ + S +
Sbjct: 1596 NEVKSPTKKEKSPEKSVVEELKSPKEKSPEKADDKPKSPTKK----EKSPEKSATEDVKS 1651
Query: 635 PMRLPGDPCRVGPKPRMTTPRTMS 706
P + P +V KP T + S
Sbjct: 1652 PTKKEKSPEKVEEKPTSPTKKESS 1675
>AF025466-5|AAB71031.2| 428|Caenorhabditis elegans Nematode astacin
protease protein27 protein.
Length = 428
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 113 LTTYRKDYLWPNLPHVGGDGETSGLADTPKLSGQELAFYQACMQHT 250
+T + Y++P++ G+G S + P L Q L+ ++C HT
Sbjct: 100 VTFHENRYVYPHVSIFEGNGCWSFVGKQPSLREQSLSLERSCTDHT 145
>Z81134-5|CAB54316.1| 101|Caenorhabditis elegans Hypothetical
protein T28D6.9 protein.
Length = 101
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -3
Query: 247 MLHACLVER*FLTRQFWCVS*A*GFPIATHMR*VRPQIIFSVGGEI 110
++ AC + ++ FW S A PI H R +R +I S+ G I
Sbjct: 20 LIGACFLPLVWIVNTFWFFSDAFCKPINAHRRQIRKYVIASIVGSI 65
>Z66519-6|CAA91374.3| 394|Caenorhabditis elegans Hypothetical
protein B0334.6 protein.
Length = 394
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 105 SILFVCLSVYTKILNCSFSILDYKIISKVY 16
+IL+VCLS LN S + Y ++SK Y
Sbjct: 315 AILYVCLSQQLVFLNASLNFCLYCVVSKRY 344
>AC087079-8|AAK27871.1| 88|Caenorhabditis elegans Hypothetical
protein Y37E3.8b protein.
Length = 88
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 89 HTNKMDHYLTTYRKDYLWPNLPHVGGDGETSGLADTPKLSGQELAFYQ 232
H NK HY T + LW +P D T G +P + +L +++
Sbjct: 5 HLNKNQHYCPTVNVERLWSLVPQEVRDKATGG--KSPVIDCTKLGYFK 50
>AC087079-7|AAK27870.1| 145|Caenorhabditis elegans Hypothetical
protein Y37E3.8a protein.
Length = 145
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 89 HTNKMDHYLTTYRKDYLWPNLPHVGGDGETSGLADTPKLSGQELAFYQ 232
H NK HY T + LW +P D T G +P + +L +++
Sbjct: 62 HLNKNQHYCPTVNVERLWSLVPQEVRDKATGG--KSPVIDCTKLGYFK 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,601,492
Number of Sequences: 27780
Number of extensions: 476854
Number of successful extensions: 1757
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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