Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1f08
         (325 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6IGW6 Cluster: HDC04748; n=1; Drosophila melanogaster|...    33   1.6  
UniRef50_A7I2K4 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_Q8SZU1 Cluster: GH10778p; n=1; Drosophila melanogaster|...    30   8.6  

>UniRef50_Q6IGW6 Cluster: HDC04748; n=1; Drosophila
           melanogaster|Rep: HDC04748 - Drosophila melanogaster
           (Fruit fly)
          Length = 52

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +3

Query: 144 SSACNIWEAIHNDPFNWNLFKSLTFFFLGLKL 239
           S+  +I  +I+N+ F W L KS   FFLG++L
Sbjct: 5   SNPLSIVRSIYNNEFQWMLVKSYGLFFLGVRL 36


>UniRef50_A7I2K4 Cluster: Putative uncharacterized protein; n=1;
           Campylobacter hominis ATCC BAA-381|Rep: Putative
           uncharacterized protein - Campylobacter hominis (strain
           ATCC BAA-381 / LMG 19568 / NCTC 13146 /CH001A)
          Length = 248

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +3

Query: 189 NWNLFKSLTFFFLGLKLFHDMARNANKI*NSKYLFY 296
           N ++F  LT  F GL LF  M ++  +I NSK+ F+
Sbjct: 161 NLSIFLILTLIFFGLFLFFVMPQSIYQIYNSKFRFF 196


>UniRef50_Q8SZU1 Cluster: GH10778p; n=1; Drosophila
           melanogaster|Rep: GH10778p - Drosophila melanogaster
           (Fruit fly)
          Length = 407

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 183 DHCESLPKCCRHSKRPPS 130
           D CE+L KCCR  K PP+
Sbjct: 313 DLCEALEKCCRDPKDPPA 330


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,020,771
Number of Sequences: 1657284
Number of extensions: 3328383
Number of successful extensions: 7558
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7558
length of database: 575,637,011
effective HSP length: 84
effective length of database: 436,425,155
effective search space used: 10037778565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)