Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1f08
         (325 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC051193-1|AAH51193.1|  733|Homo sapiens NFXL1 protein protein.        27   9.8  
AK131285-1|BAD18459.1|  736|Homo sapiens protein ( Homo sapiens ...    27   9.8  
AC107068-2|AAY40918.1|  733|Homo sapiens unknown protein.              27   9.8  

>BC051193-1|AAH51193.1|  733|Homo sapiens NFXL1 protein protein.
          Length = 733

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 162 KCCRHSKRPPSHKPLISFTQVI 97
           +C +H+KR P HKP +  T+ +
Sbjct: 450 RCGKHTKRMPCHKPYLCETKCV 471


>AK131285-1|BAD18459.1|  736|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16238 fis, clone HCASM2003018, weakly  similar
           to Homo sapiens nuclear transcription factor NFX2 (NFX2)
           mRNA. ).
          Length = 736

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 162 KCCRHSKRPPSHKPLISFTQVI 97
           +C +H+KR P HKP +  T+ +
Sbjct: 293 RCGKHTKRMPCHKPYLCETKCV 314


>AC107068-2|AAY40918.1|  733|Homo sapiens unknown protein.
          Length = 733

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 162 KCCRHSKRPPSHKPLISFTQVI 97
           +C +H+KR P HKP +  T+ +
Sbjct: 450 RCGKHTKRMPCHKPYLCETKCV 471


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,902,316
Number of Sequences: 237096
Number of extensions: 522036
Number of successful extensions: 4565
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4565
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)