Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1f06
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    29   0.027
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    29   0.027
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   1.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.2  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   4.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   5.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.3  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
 Frame = +1

Query: 256 DITNECQLFIKAEDGGGDASIKINENMPGENSGKPKFVTSTPDE---KKESPSENQIADS 426
           DI +EC+ F+  +  GG      NEN+   +S +P +    P        S  E  +AD 
Sbjct: 39  DIADECERFLAPKGFGGVQISPPNENLVVTSSNRPWWERYQPVSYILNTRSGDEAALADM 98

Query: 427 NPECDMEGV 453
              C+  GV
Sbjct: 99  ISRCNAVGV 107


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
 Frame = +1

Query: 256 DITNECQLFIKAEDGGGDASIKINENMPGENSGKPKFVTSTPDE---KKESPSENQIADS 426
           DI +EC+ F+  +  GG      NEN+   +S +P +    P        S  E  +AD 
Sbjct: 40  DIADECERFLAPKGFGGVQISPPNENLVVTSSNRPWWERYQPVSYILNTRSGDEAALADM 99

Query: 427 NPECDMEGV 453
              C+  GV
Sbjct: 100 ISRCNAVGV 108


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +1

Query: 373 STPDEKKESPSENQIADSNPECDMEGVPELPLDE 474
           STPD++++SP+    +D   E D E V +  +DE
Sbjct: 843 STPDKREKSPT----SDKAQEADGEVVVKKEVDE 872


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +3

Query: 309 CI-NKNQ*KYARGEQWKTKVCNI 374
           C+ NKNQ +   G  W  KVC++
Sbjct: 114 CVQNKNQYQCLCGVGWTGKVCDV 136


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 127 EEFGNRYLEEMDAA 168
           EE+ N+Y +E+DAA
Sbjct: 18  EEYTNQYNDELDAA 31


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 460 VLEHLPYHILD*NQQFDFQKGFPFFHQELMLQTLV 356
           +L  L + +    +QF F++ F   H  + + TLV
Sbjct: 189 LLSSLGFLLYASKKQFTFEETFAIIHLSVFVYTLV 223


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 626 THNSTVTMWGFTSCITRD 573
           T N+T T+W    C+  D
Sbjct: 141 TPNATNTVWSHCQCVLAD 158


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 626 THNSTVTMWGFTSCITRD 573
           T N+T T+W    C+  D
Sbjct: 141 TPNATNTVWSHCQCVLAD 158


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.313    0.135    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,703
Number of Sequences: 336
Number of extensions: 3070
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)