Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1f04
         (700 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2QXC8 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_Q6MK07 Cluster: Cation transport ATPase, E1-E2 family p...    33   5.1  
UniRef50_A0CJU1 Cluster: Chromosome undetermined scaffold_2, who...    33   8.9  

>UniRef50_A2QXC8 Cluster: Putative uncharacterized protein; n=1;
           Aspergillus niger|Rep: Putative uncharacterized protein
           - Aspergillus niger
          Length = 189

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 585 ISRQSMPLKHSTRKDSLHPFLGLEKRNQF 671
           ++ QS+PLK  T K  +HPFLG+    +F
Sbjct: 57  VTTQSIPLKRLTGKTPMHPFLGIPSSEEF 85


>UniRef50_Q6MK07 Cluster: Cation transport ATPase, E1-E2 family
           precursor; n=1; Bdellovibrio bacteriovorus|Rep: Cation
           transport ATPase, E1-E2 family precursor - Bdellovibrio
           bacteriovorus
          Length = 798

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
 Frame = +2

Query: 176 LTFPLAFLCCQGVGMPLSEATSSDIKDGAIKQLKYDVAG--MENHRTKQHGHPALIDP 343
           LTF LA    Q +G+ L +ATS + +   +K + +D  G   E H +  H  PA+I P
Sbjct: 485 LTFGLALKKSQRLGILLKDATSLE-RMLEVKNIFFDKTGTLTEGHLSLSHSEPAIISP 541


>UniRef50_A0CJU1 Cluster: Chromosome undetermined scaffold_2, whole
           genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_2,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 735

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
 Frame = +2

Query: 8   STLHLNIVFSKAH---YHQPTEPQSV*ECYMITVSCYKFHRITSRFVRLWRKVQTVSDYL 178
           +TL L    SK +   YH P  PQ   E +   V C KF+++T  F R     + +++  
Sbjct: 461 NTLPLEFGLSKQYSESYHTPI-PQKQEESFKYCVVCMKFNQLTKPFYRCRLCEKLLNENK 519

Query: 179 TFPLAFLCCQGVGMPLSEATSSDIKDGAIKQLKYDVAGMENHRTKQHGH 325
            F  AF C +      S+    D K   I+QL   V    +  ++ H H
Sbjct: 520 IFICAFPCFELFHRNPSQFIECDNK--IIEQLSDGVYFSNDLNSQNHYH 566


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,604,938
Number of Sequences: 1657284
Number of extensions: 14278151
Number of successful extensions: 35758
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35751
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)