Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1f04
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   1.7  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       25   2.3  
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       24   5.3  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       24   5.3  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    24   5.3  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.2  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
 Frame = +2

Query: 320 GHPALIDPGRSSGEPLNEGHYTID-FAPAPGDNEE 421
           G P L+ P   SGEP  +    +D   P  GD  E
Sbjct: 634 GEPGLLGPPGPSGEPGRDAEIPMDQLKPIKGDKGE 668


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 546 AVKRPHLKSMKQTISRQSMPLKHSTRKDSLHPFLGLE 656
           A KRPH+K  K    + + P   S R  +    LG E
Sbjct: 112 AAKRPHMKKKKVLFHQDNAPCHKSLRTMAKIDELGFE 148


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 546 AVKRPHLKSMKQTISRQSMPLKHSTRKDSLHPFLGLE 656
           A KRPHLK  K    + + P   S +       LG E
Sbjct: 112 ATKRPHLKKKKFLFHQDNAPCHKSVKTMEKIQELGYE 148


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 13/37 (35%), Positives = 16/37 (43%)
 Frame = +3

Query: 546 AVKRPHLKSMKQTISRQSMPLKHSTRKDSLHPFLGLE 656
           A KRPHLK  K    + + P   S +       LG E
Sbjct: 112 ATKRPHLKKKKFLFHQDNAPCHKSVKTMEKIQELGYE 148


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 119 RITSRFVRLWRKVQTVSDYLTFPLAFLCCQGVGMP 223
           RIT R  +L R    ++   T P+  +C + +GMP
Sbjct: 54  RITPRLAKLQRGDIIITKSPTKPVQHVCKRIIGMP 88


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = +3

Query: 510  SRFKRRTNQRQRAVKRPHLKSMKQTISRQSMPLKHSTRKDSLHPFLGLEKRN 665
            ++     N R  +++     S+K   S ++ P K  + K S     G EKR+
Sbjct: 1172 NKLDHELNHRGVSLQDDDTASIKSYGSHKNRPFKDESHKGSAETMEGEEKRD 1223


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,228
Number of Sequences: 2352
Number of extensions: 15606
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)