Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1f02
         (390 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7P758 Cluster: Chromosome chr9 scaffold_7, whole genom...    33   2.0  
UniRef50_A7SGL7 Cluster: Predicted protein; n=1; Nematostella ve...    31   6.0  
UniRef50_Q39I39 Cluster: Alpha/beta hydrolase; n=58; Proteobacte...    31   7.9  
UniRef50_A4YSE7 Cluster: N-carbamoyl-D-amino acid hydrolase; n=1...    31   7.9  

>UniRef50_A7P758 Cluster: Chromosome chr9 scaffold_7, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr9 scaffold_7, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 2485

 Score = 33.1 bits (72), Expect = 2.0
 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
 Frame = -3

Query: 298 LCKQVHGPPDVKLLEPID---VYNVNAVTYLEIIILRFQSIVQRPPHPSNRNALLLHGRN 128
           L  +  G  ++ L+E +D   V+ V+     + I L   S+ +    PS  N L L  R+
Sbjct: 446 LASEYRGNKNIILVEEVDTMEVHQVSKAKEAQRIYLSTSSLEELTIPPSFPNLLTLIVRS 505

Query: 127 RQGGGIYPRGLFFFLPKLVAL 65
           R G G +P G F F P +  L
Sbjct: 506 R-GLGTFPSGFFHFTPVIKVL 525


>UniRef50_A7SGL7 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 396

 Score = 31.5 bits (68), Expect = 6.0
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -3

Query: 202 LRFQSIVQRPPHPSNRNALLLHGRNRQ 122
           LR Q+ VQR P P+ RN++ LHG   Q
Sbjct: 119 LRQQNQVQRRPEPTPRNSIFLHGLRAQ 145


>UniRef50_Q39I39 Cluster: Alpha/beta hydrolase; n=58;
           Proteobacteria|Rep: Alpha/beta hydrolase - Burkholderia
           sp. (strain 383) (Burkholderia cepacia (strain ATCC
           17760/ NCIB 9086 / R18194))
          Length = 353

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = -3

Query: 286 VHGPPDVKLLEPIDVYNVNAVTYLEIIILRFQSIVQRPPHPSNRNALLLHGRN 128
           V+GP       P  V+    V+  E + + +  +  +P HP+ R  +LLHG+N
Sbjct: 42  VYGPRLEGFTYPAPVHLYTFVSQRETLEMAYLDV--QPAHPNGRTVVLLHGKN 92


>UniRef50_A4YSE7 Cluster: N-carbamoyl-D-amino acid hydrolase; n=11;
           Proteobacteria|Rep: N-carbamoyl-D-amino acid hydrolase -
           Bradyrhizobium sp. (strain ORS278)
          Length = 318

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -3

Query: 247 DVYNVNAVTYLEIIILRFQSIVQRPPHPSNRNALLLHGRNRQGGGIYPRG 98
           + Y V  +  +E++++ + + V  PP P + +  L H R     G Y  G
Sbjct: 178 ETYRVMGLQGVEMVLIGYNTPVHNPPAPEHDDLSLFHNRLVMQSGAYQNG 227


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 322,540,837
Number of Sequences: 1657284
Number of extensions: 5228770
Number of successful extensions: 10036
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10036
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)