Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1e24
         (192 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q555J5 Cluster: Putative uncharacterized protein; n=1; ...    34   0.70 
UniRef50_UPI000051ABD2 Cluster: PREDICTED: similar to Probable d...    33   1.6  
UniRef50_Q5CTB5 Cluster: WD repeat protein; n=3; Eukaryota|Rep: ...    33   1.6  
UniRef50_Q4N8X2 Cluster: Putative uncharacterized protein; n=2; ...    31   5.0  
UniRef50_Q4N027 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  

>UniRef50_Q555J5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 90

 Score = 33.9 bits (74), Expect = 0.70
 Identities = 18/53 (33%), Positives = 31/53 (58%)
 Frame = -3

Query: 190 FFLIYILLK*CSKLVTV**MQIQFVLFIIFIDFHLFVKITLLINYMVVFASGC 32
           FF+I+I L   + ++ +    I ++LFIIFI   +F+ I  LI+++  F   C
Sbjct: 32  FFIIFIYLLIINIIIII----INYLLFIIFIFIFIFIFIFFLISFLFFFCCCC 80


>UniRef50_UPI000051ABD2 Cluster: PREDICTED: similar to Probable
           dolichyl pyrophosphate Glc1Man9GlcNAc2
           alpha-1,3-glucosyltransferase
           (Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl
           glucosyltransferase) (Asparagine-linked glycosylation
           protein 8 homolog); n=2; Apocrita|Rep: PREDICTED:
           similar to Probable dolichyl pyrophosphate
           Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase
           (Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl
           glucosyltransferase) (Asparagine-linked glycosylation
           protein 8 homolog) - Apis mellifera
          Length = 524

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = -2

Query: 185 FDIHFIEVMFEISN-SVINANTVRFIYNFYRLS-FIRKNNSVNKLYGSLCFRL 33
           FD H + ++F + N  ++  + + F YN + L  F+    +++ LYG+LCF L
Sbjct: 152 FDEHVMFIVFSLCNMGLLVVDHIHFQYNGFLLGIFLLAIANISILYGTLCFAL 204


>UniRef50_Q5CTB5 Cluster: WD repeat protein; n=3; Eukaryota|Rep: WD
            repeat protein - Cryptosporidium parvum Iowa II
          Length = 3948

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 149  SNSVINANTVRFIYNFYRLSFIRKNNSVNKLYGSLC 42
            +N +IN  T + +Y+  RLS I K   +N+L+G LC
Sbjct: 3638 NNGIINQETKKSVYD--RLSCIVKKEELNQLFGDLC 3671


>UniRef50_Q4N8X2 Cluster: Putative uncharacterized protein; n=2;
           Theileria|Rep: Putative uncharacterized protein -
           Theileria parva
          Length = 1746

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +2

Query: 8   GGNTKINSATGSKDYHIIY*QSYFYE*MKVYKNYK*NELYLHLLH 142
           GGNTK N  TGS+D  +   QS   E + +  N   N++ +++LH
Sbjct: 784 GGNTKNNKITGSEDNEVSE-QSLIREILVLLYNKANNDIVVNILH 827


>UniRef50_Q4N027 Cluster: Putative uncharacterized protein; n=1;
            Theileria parva|Rep: Putative uncharacterized protein -
            Theileria parva
          Length = 1125

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 137  INANTVRFIYNFYRLSFIRKNNSVNKLYGSLCFRLH 30
            IN+ T+R IYN+    FI +NN   +L  +L  + H
Sbjct: 1019 INSQTLRVIYNYRTWKFIIQNNLKTELLSNLSSQTH 1054


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,485,502
Number of Sequences: 1657284
Number of extensions: 1873391
Number of successful extensions: 5570
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5566
length of database: 575,637,011
effective HSP length: 43
effective length of database: 504,373,799
effective search space used: 10087475980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)