Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1e23
         (749 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   3.1  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   3.1  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   7.1  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   9.3  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   9.3  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   9.3  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   9.3  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   9.3  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    21   9.3  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -2

Query: 745 IVISKTSTTLF*DIDKFHYKNNDYSCNI*AKHLH 644
           I+ S ++ T+  +  K++Y NN+Y+ N   K L+
Sbjct: 80  IISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLY 113


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -2

Query: 745 IVISKTSTTLF*DIDKFHYKNNDYSCNI*AKHLH 644
           I+ S ++ T+  +  K++Y NN+Y+ N   K L+
Sbjct: 80  IISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLY 113


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 127 ESVKSIISSLKDIVLCFFI 71
           +S KS+I  L  +V+ FFI
Sbjct: 263 QSRKSVIKMLSAVVILFFI 281


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 745 IVISKTSTTLF*DIDKFHYKNNDYS 671
           I+ S ++ T+  +  K++Y NN+Y+
Sbjct: 81  IISSLSNNTIHNNNYKYNYNNNNYN 105


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 745 IVISKTSTTLF*DIDKFHYKNNDYS 671
           I+ S ++ T+  +  K++Y NN+Y+
Sbjct: 81  IISSLSNNTIHNNNYKYNYNNNNYN 105


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 745 IVISKTSTTLF*DIDKFHYKNNDYS 671
           I+ S ++ T+  +  K++Y NN+Y+
Sbjct: 81  IISSLSNNTIHNNNYKYNYNNNNYN 105


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 745 IVISKTSTTLF*DIDKFHYKNNDYS 671
           I+ S ++ T+  +  K++Y NN+Y+
Sbjct: 81  IISSLSNNTIHNNNYKYNYNNNNYN 105


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 703 DKFHYKNNDYSCNI*AKHLHILIE 632
           +K++Y NN+Y+  +  K+  I IE
Sbjct: 102 NKYNYNNNNYNKKLYYKNYIINIE 125


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 258 YSIDNSHTLEKKGNKKKESTSTKKQNSHSTS 350
           Y +     +EK G+++ +S S   ++  STS
Sbjct: 64  YELRRIREIEKLGSERSKSRSPDSRDRSSTS 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,507
Number of Sequences: 438
Number of extensions: 4276
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)