Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1e20
         (700 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK122616-1|BAC85491.1|  703|Homo sapiens protein ( Homo sapiens ...    50   6e-06
AK097644-1|BAC05131.1|  630|Homo sapiens protein ( Homo sapiens ...    50   6e-06
BC028198-1|AAH28198.1|  669|Homo sapiens EF-hand domain family, ...    48   2e-05

>AK122616-1|BAC85491.1|  703|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16028 fis, clone HLUNG2002958. ).
          Length = 703

 Score = 50.4 bits (115), Expect = 6e-06
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +3

Query: 390 IVNPPIKTKFQTLVEDLKNTIYSSYWKSPLGQVKDSVPMLPEGFDST-TTFGKKTPDHGR 566
           ++NP   T FQ  ++D K +IY S  ++PLG+  D  P LP+G D+T TTFG        
Sbjct: 206 LINPQPITTFQQKIKDKKESIYLSNRRAPLGKSHDQAPGLPKGMDTTNTTFGTAVIKEYS 265

Query: 567 LYEIVMP 587
             ++V P
Sbjct: 266 AKDVVNP 272


>AK097644-1|BAC05131.1|  630|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40325 fis, clone TESTI2031007. ).
          Length = 630

 Score = 50.4 bits (115), Expect = 6e-06
 Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = +3

Query: 390 IVNPPIKTKFQTLVEDLKNTIYSSYWKSPLGQVKDSVPMLPEGFDST-TTFGKKTPDHGR 566
           ++NP   T FQ  ++D K +IY S  ++PLG+  D  P LP+G D+T TTFG        
Sbjct: 334 LINPQPITTFQQKIKDKKESIYLSNRRAPLGKSHDQAPGLPKGMDTTNTTFGTAVIKEYS 393

Query: 567 LYEIVMP 587
             ++V P
Sbjct: 394 AKDVVNP 400


>BC028198-1|AAH28198.1|  669|Homo sapiens EF-hand domain family,
           member B protein.
          Length = 669

 Score = 48.4 bits (110), Expect = 2e-05
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = +3

Query: 390 IVNPPIKTKFQTLVEDLKNTIYSSYWKSPLGQVKDSVPMLPEGFDS-TTTFGKKTPDHGR 566
           ++NP   T FQ  ++D K +IY S  ++PLG+  D  P LP+G D+  TTFG        
Sbjct: 172 LINPQPITTFQQKIKDKKESIYLSNRRAPLGKSHDQAPGLPKGMDTINTTFGTAVIKEYS 231

Query: 567 LYEIVMP 587
             ++V P
Sbjct: 232 AKDVVNP 238


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,788,282
Number of Sequences: 237096
Number of extensions: 2018441
Number of successful extensions: 4966
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4966
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)