Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1e15
(773 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical p... 33 0.30
Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical pr... 30 1.6
AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopam... 30 1.6
AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopam... 30 1.6
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 28 8.5
>L15188-11|AAA27954.4| 1226|Caenorhabditis elegans Hypothetical
protein C14B9.8 protein.
Length = 1226
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = -1
Query: 611 KKLYTKNVLTKQELAFQAPQAS----KILNKSNNRDTIM*DM*YTIIVYVTNMSRSEPKI 444
+K T + +K+E P+ + KI+N++ D + IIVY+ ++ R+EPK+
Sbjct: 872 QKQITVGIASKKEEVITCPKTNEELEKIMNRAYGDDANSFTLAQEIIVYLGSLVRTEPKL 931
Query: 443 FSRFWKSR 420
F ++ R
Sbjct: 932 FLEMFRLR 939
>Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical
protein K09G1.4b protein.
Length = 840
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = -2
Query: 616 DGRNYT----RRMYSLNRNWPSKHHRRV 545
DGR+Y+ +R +L+RN+ +KHHR+V
Sbjct: 460 DGRSYSIKGQKRFRNLSRNYSTKHHRKV 487
>Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical
protein K09G1.4a protein.
Length = 705
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = -2
Query: 616 DGRNYT----RRMYSLNRNWPSKHHRRV 545
DGR+Y+ +R +L+RN+ +KHHR+V
Sbjct: 325 DGRSYSIKGQKRFRNLSRNYSTKHHRKV 352
>AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopamine
receptor shortvariant protein.
Length = 705
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = -2
Query: 616 DGRNYT----RRMYSLNRNWPSKHHRRV 545
DGR+Y+ +R +L+RN+ +KHHR+V
Sbjct: 325 DGRSYSIKGQKRFRNLSRNYSTKHHRKV 352
>AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopamine
receptor longvariant protein.
Length = 840
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 4/28 (14%)
Frame = -2
Query: 616 DGRNYT----RRMYSLNRNWPSKHHRRV 545
DGR+Y+ +R +L+RN+ +KHHR+V
Sbjct: 460 DGRSYSIKGQKRFRNLSRNYSTKHHRKV 487
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical protein
C29A12.4 protein.
Length = 1560
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 25 RHCALAHSIYSIFEFKFNKITVYNSAQIIAVKTFFTVDFGHCVQKYVCLFCNFKILYVHS 204
R C++ +++ +F+F+ + VYNS I + G C+Q + + C+ L HS
Sbjct: 1051 RGCSVL-TLFELFQFECKLLNVYNSGPIARCIEDACANHGRCIQLWSSIRCDCS-LTAHS 1108
>Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical
protein T23D5.12 protein.
Length = 350
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +1
Query: 553 CGAWKANSCLVSTFFVYSFFHLFLTIGLIVWEALTAGWIQXXXXXXXXXXXXXXXFGVKY 732
CG + + C +S F+Y ++ LF LI +E GW+ G+ Y
Sbjct: 99 CGIYGSTICFISVQFLYRYWALFDAPKLIWFE----GWMMSAWLIYSFGIGATWSIGIHY 154
Query: 733 LME 741
+E
Sbjct: 155 FLE 157
>Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical
protein T23D5.10 protein.
Length = 364
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +1
Query: 553 CGAWKANSCLVSTFFVYSFFHLFLTIGLIVWEALTAGWIQXXXXXXXXXXXXXXXFGVKY 732
CG + + C +S F+Y ++ LF LI +E GW+ G+ Y
Sbjct: 113 CGIYGSTICFISVQFLYRYWALFDAPKLIWFE----GWMMSAWLIYSFGIGATWSIGIHY 168
Query: 733 LME 741
+E
Sbjct: 169 FLE 171
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 633 TYCVGGFNSWLDTTRADFALRCAPHCLLVRRQI 731
T CV G +S ++ T +F ++C P C + Q+
Sbjct: 88 TRCVVGCSSTMNNTSEEFGIKC-PECRKINEQV 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,514,479
Number of Sequences: 27780
Number of extensions: 361749
Number of successful extensions: 1019
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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