Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1e14
         (716 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0038 - 282431-283954                                             32   0.40 
01_01_0441 - 3305319-3305894                                           29   3.7  
02_03_0106 + 15292869-15296138                                         28   8.5  

>08_01_0038 - 282431-283954
          Length = 507

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 26/96 (27%), Positives = 43/96 (44%)
 Frame = +3

Query: 381 TLKMDNLYTKGELLQVHTKNYDVFEGRFYSMAQDKTKISLYDVKEIPHGDANDGVLHYYD 560
           TL + +  T   +L+ H +   VF  R Y+   D       DV   P+GD        Y 
Sbjct: 82  TLVVSSARTAQAILRTHDR---VFASRPYNTIADILLYGATDVAFSPYGD--------YW 130

Query: 561 SEIREVVKLQESTEKKVLKISQTKYEEILKISKKYI 668
            +I+++V +   T KKV    QT+ +E+  +  K +
Sbjct: 131 RQIKKIVTMNLLTIKKVHSYGQTRQQEVRLVMAKIV 166


>01_01_0441 - 3305319-3305894
          Length = 191

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 189 HEEGKYWHDYNYHAVFYYRSKHLKIWQLICAP 94
           H+EGK W D++Y+ V  Y +  L     IC P
Sbjct: 159 HDEGKRWADHDYYNVM-YATGPLAFRPAICPP 189


>02_03_0106 + 15292869-15296138
          Length = 1089

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -3

Query: 501  IVIFWSYLGPYYRIYLQRRRSFLC--ELVTVLLLCRGC 394
            ++IFWS   P +   L R+R  LC  EL   L L R C
Sbjct: 1008 LIIFWSIAFPRWLELLIRKRDGLCHFELQCSLSLLRSC 1045


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,170,409
Number of Sequences: 37544
Number of extensions: 323285
Number of successful extensions: 767
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)