Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1e09
         (749 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   3.4  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   4.6  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   4.6  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.0  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   8.0  

>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +3

Query: 87  WCANRQRVLGAVLSRTWHPTRRAD 158
           W AN +R L      TW P  + D
Sbjct: 134 WFANARRRLKKENKMTWEPKNKTD 157


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 228 TGSCFAEECVEGIVSAADGFV 166
           T + FA  C++G+VSA +  V
Sbjct: 4   TSALFAFICIQGLVSAEEYLV 24


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -1

Query: 536 P*STERRSIRSDAKPDPVPPPNE 468
           P   E+ S+     P P PPP E
Sbjct: 85  PILAEKVSVSPTTPPTPSPPPEE 107


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 109 CWELYCLEHGIQPDGQMPSDKT 174
           CW  Y +   +Q  GQ+P  +T
Sbjct: 263 CWSPYIIFDLLQVFGQIPGTQT 284


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 133 HGIQPDGQMPSDKTV 177
           HGIQP   +PS + V
Sbjct: 169 HGIQPSPTLPSKEEV 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,811
Number of Sequences: 336
Number of extensions: 4138
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)