Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1e06
         (701 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.8  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   2.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 87  KRKEVRPIFPLR*LCNSGT 143
           K   +R + PL+ LCN+GT
Sbjct: 142 KDAALRKVVPLKKLCNNGT 160


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 249 NGCVTFRMGGHASLV 205
           N  V+F MGGH SL+
Sbjct: 44  NSPVSFSMGGHGSLL 58


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 313 EALLVTFFKGFNFVLC 266
           + LL+TF  G N V C
Sbjct: 636 QILLITFQSGLNVVSC 651


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
 Frame = +2

Query: 308 SFYQR--CLPFSALFASLTYAAVKY 376
           SF  R  CLPF + F  L+Y    Y
Sbjct: 74  SFMSRFLCLPFYSYFFYLSYIYTTY 98


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
 Frame = +2

Query: 308 SFYQR--CLPFSALFASLTYAAVKY 376
           SF  R  CLPF + F  L+Y    Y
Sbjct: 30  SFMSRFLCLPFYSYFFYLSYIYTTY 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,769
Number of Sequences: 336
Number of extensions: 3937
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)