BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1e06
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC088361-1|AAH88361.1| 245|Homo sapiens OCIA domain containing ... 80 9e-15
BC003409-1|AAH03409.1| 245|Homo sapiens OCIA domain containing ... 80 9e-15
AK000462-1|BAA91181.1| 245|Homo sapiens protein ( Homo sapiens ... 80 9e-15
AF324350-1|AAK12121.1| 187|Homo sapiens ovarian immunoreactive ... 80 9e-15
AF323665-1|AAG45220.1| 245|Homo sapiens ovarian carcinoma immun... 80 9e-15
AF251296-1|AAG44596.1| 245|Homo sapiens TPA018 protein. 80 9e-15
AY472117-1|AAS47684.1| 154|Homo sapiens ovarian carcinoma immun... 69 2e-11
BC032808-1|AAH32808.1| 99|Homo sapiens OCIA domain containing ... 49 1e-05
CR533471-1|CAG38502.1| 212|Homo sapiens PXMP4 protein. 31 4.0
BC001147-1|AAH01147.1| 212|Homo sapiens PXMP4 protein protein. 31 4.0
AL050349-1|CAC14086.1| 212|Homo sapiens peroxisomal membrane pr... 31 4.0
AF072864-1|AAD43195.1| 212|Homo sapiens peroxisomal membrane pr... 31 4.0
>BC088361-1|AAH88361.1| 245|Homo sapiens OCIA domain containing 1
protein.
Length = 245
Score = 79.8 bits (188), Expect = 9e-15
Identities = 42/112 (37%), Positives = 63/112 (56%)
Frame = +2
Query: 194 AESRTSDACPPIRNVTHPLRYYEFTQDEIKALEECDKESFYQRCLPFSALFASLTYAAVK 373
A+ R +A P R + H Y T++E + EC+ ESF+ R +P +A +T +
Sbjct: 5 ADFREPNAEVP-RPIPHIGPDYIPTEEERRVFAECNDESFWFRSVPLAATSMLITQGLIS 63
Query: 374 YGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYIGQILR 529
G L +P++G PK+ LA ++GYF GKLSY + C EK L S +G+ LR
Sbjct: 64 KGILSSHPKYGSIPKLILACIMGYFAGKLSYVKTCQEKFKKLENSPLGEALR 115
>BC003409-1|AAH03409.1| 245|Homo sapiens OCIA domain containing 1
protein.
Length = 245
Score = 79.8 bits (188), Expect = 9e-15
Identities = 42/112 (37%), Positives = 63/112 (56%)
Frame = +2
Query: 194 AESRTSDACPPIRNVTHPLRYYEFTQDEIKALEECDKESFYQRCLPFSALFASLTYAAVK 373
A+ R +A P R + H Y T++E + EC+ ESF+ R +P +A +T +
Sbjct: 5 ADFREPNAEVP-RPIPHIGPDYIPTEEERRVFAECNDESFWFRSVPLAATSMLITQGLIS 63
Query: 374 YGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYIGQILR 529
G L +P++G PK+ LA ++GYF GKLSY + C EK L S +G+ LR
Sbjct: 64 KGILSSHPKYGSIPKLILACIMGYFAGKLSYVKTCQEKFKKLENSPLGEALR 115
>AK000462-1|BAA91181.1| 245|Homo sapiens protein ( Homo sapiens
cDNA FLJ20455 fis, clone KAT05813. ).
Length = 245
Score = 79.8 bits (188), Expect = 9e-15
Identities = 42/112 (37%), Positives = 63/112 (56%)
Frame = +2
Query: 194 AESRTSDACPPIRNVTHPLRYYEFTQDEIKALEECDKESFYQRCLPFSALFASLTYAAVK 373
A+ R +A P R + H Y T++E + EC+ ESF+ R +P +A +T +
Sbjct: 5 ADFREPNAEVP-RPIPHIGPDYIPTEEERRVFAECNDESFWFRSVPLAATSMLITQGLIS 63
Query: 374 YGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYIGQILR 529
G L +P++G PK+ LA ++GYF GKLSY + C EK L S +G+ LR
Sbjct: 64 KGILSSHPKYGSIPKLILACIMGYFAGKLSYVKTCQEKFKKLENSPLGEALR 115
>AF324350-1|AAK12121.1| 187|Homo sapiens ovarian immunoreactive
antigen protein.
Length = 187
Score = 79.8 bits (188), Expect = 9e-15
Identities = 42/112 (37%), Positives = 63/112 (56%)
Frame = +2
Query: 194 AESRTSDACPPIRNVTHPLRYYEFTQDEIKALEECDKESFYQRCLPFSALFASLTYAAVK 373
A+ R +A P R + H Y T++E + EC+ ESF+ R +P +A +T +
Sbjct: 5 ADFREPNAEVP-RPIPHIGPDYIPTEEERRVFAECNDESFWFRSVPLAATSMLITQGLIS 63
Query: 374 YGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYIGQILR 529
G L +P++G PK+ LA ++GYF GKLSY + C EK L S +G+ LR
Sbjct: 64 KGILSSHPKYGSIPKLILACIMGYFAGKLSYVKTCQEKFKKLENSPLGEALR 115
>AF323665-1|AAG45220.1| 245|Homo sapiens ovarian carcinoma
immunoreactive antigen protein.
Length = 245
Score = 79.8 bits (188), Expect = 9e-15
Identities = 42/112 (37%), Positives = 63/112 (56%)
Frame = +2
Query: 194 AESRTSDACPPIRNVTHPLRYYEFTQDEIKALEECDKESFYQRCLPFSALFASLTYAAVK 373
A+ R +A P R + H Y T++E + EC+ ESF+ R +P +A +T +
Sbjct: 5 ADFREPNAEVP-RPIPHIGPDYIPTEEERRVFAECNDESFWFRSVPLAATSMLITQGLIS 63
Query: 374 YGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYIGQILR 529
G L +P++G PK+ LA ++GYF GKLSY + C EK L S +G+ LR
Sbjct: 64 KGILSSHPKYGSIPKLILACIMGYFAGKLSYVKTCQEKFKKLENSPLGEALR 115
>AF251296-1|AAG44596.1| 245|Homo sapiens TPA018 protein.
Length = 245
Score = 79.8 bits (188), Expect = 9e-15
Identities = 42/112 (37%), Positives = 63/112 (56%)
Frame = +2
Query: 194 AESRTSDACPPIRNVTHPLRYYEFTQDEIKALEECDKESFYQRCLPFSALFASLTYAAVK 373
A+ R +A P R + H Y T++E + EC+ ESF+ R +P +A +T +
Sbjct: 5 ADFREPNAEVP-RPIPHIGPDYIPTEEERRVFAECNDESFWFRSVPLAATSMLITQGLIS 63
Query: 374 YGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYIGQILR 529
G L +P++G PK+ LA ++GYF GKLSY + C EK L S +G+ LR
Sbjct: 64 KGILSSHPKYGSIPKLILACIMGYFAGKLSYVKTCQEKFKKLENSPLGEALR 115
>AY472117-1|AAS47684.1| 154|Homo sapiens ovarian carcinoma
immunoreactive antigen-like protein protein.
Length = 154
Score = 68.5 bits (160), Expect = 2e-11
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +2
Query: 281 KALEECDKESFYQRCLPFSALFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGYFLGKL 460
K + EC +ESF++R LPFS + +T V G+L N RFG PKV LA ++G+ LGK+
Sbjct: 41 KIMRECQEESFWKRALPFSLVSMLVTQGLVYQGYLAANSRFGSLPKVALAGLLGFGLGKV 100
Query: 461 SYQQACAEK 487
SY C K
Sbjct: 101 SYIGVCQSK 109
>BC032808-1|AAH32808.1| 99|Homo sapiens OCIA domain containing 2
protein.
Length = 99
Score = 49.2 bits (112), Expect = 1e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 281 KALEECDKESFYQRCLPFSALFASLTYAAVKYGHLKPNPRFGPFPKV 421
K + EC +ESF++R LPFS + +T V G+L N RFG PKV
Sbjct: 41 KIMRECQEESFWKRALPFSLVSMLVTQGLVYQGYLAANSRFGSLPKV 87
>CR533471-1|CAG38502.1| 212|Homo sapiens PXMP4 protein.
Length = 212
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 341 LFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYI 514
LFA L+ AV+ G++ P PR+ PFP +T AVV G L Y ++ + + +Y+
Sbjct: 135 LFA-LSRLAVEKGYI-PEPRWDPFPLLT-AVVWGLVLWLFEYHRSTLQPSLQSSMTYL 189
>BC001147-1|AAH01147.1| 212|Homo sapiens PXMP4 protein protein.
Length = 212
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 341 LFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYI 514
LFA L+ AV+ G++ P PR+ PFP +T AVV G L Y ++ + + +Y+
Sbjct: 135 LFA-LSRLAVEKGYI-PEPRWDPFPLLT-AVVWGLVLWLFEYHRSTLQPSLQSSMTYL 189
>AL050349-1|CAC14086.1| 212|Homo sapiens peroxisomal membrane
protein 4, 24kDa protein.
Length = 212
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 341 LFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYI 514
LFA L+ AV+ G++ P PR+ PFP +T AVV G L Y ++ + + +Y+
Sbjct: 135 LFA-LSRLAVEKGYI-PEPRWDPFPLLT-AVVWGLVLWLFEYHRSTLQPSLQSSMTYL 189
>AF072864-1|AAD43195.1| 212|Homo sapiens peroxisomal membrane
protein PMP 24 protein.
Length = 212
Score = 31.1 bits (67), Expect = 4.0
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +2
Query: 341 LFASLTYAAVKYGHLKPNPRFGPFPKVTLAVVVGYFLGKLSYQQACAEKLMALPGSYI 514
LFA L+ AV+ G++ P PR+ PFP +T AVV G L Y ++ + + +Y+
Sbjct: 135 LFA-LSRLAVEKGYI-PEPRWDPFPLLT-AVVWGLVLWLFEYHRSTLQPSLQSSMTYL 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,518,080
Number of Sequences: 237096
Number of extensions: 2414239
Number of successful extensions: 6417
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6417
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -