Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1e04
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81050-10|CAB02860.1| 329|Caenorhabditis elegans Hypothetical p... 31 0.80
Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cycl... 29 2.4
Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical pr... 28 5.7
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p... 28 5.7
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 28 5.7
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related... 28 5.7
Z83744-4|CAB06040.4| 735|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81459-1|CAB03827.3| 731|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z79604-6|CAB97241.2| 731|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z81050-10|CAB02860.1| 329|Caenorhabditis elegans Hypothetical
protein C50B6.12 protein.
Length = 329
Score = 31.1 bits (67), Expect = 0.80
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +3
Query: 171 IHNINCFTKYFKKYYIIGIFAYFATI---IYHGMYIPLQNIIRLIF 299
IHN N YF + F YF TI IY GMY L II + F
Sbjct: 63 IHNFNGSLTYFSHTILSEDFLYFWTIFIDIYGGMYCSLITIIAVQF 108
>Z68118-1|CAA92186.2| 1014|Caenorhabditis elegans Hypothetical
protein R01E6.1 protein.
Length = 1014
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 465 LVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFANDMREQFKTMIKSMD 623
L++ P S + ++ + N L +KRS + I F ND+ +QF T+IK D
Sbjct: 816 LIMPPRSYESATVMFVQICDFNAL-MKRSSPEQVIAFLNDIYDQFDTVIKRHD 867
>AF235027-1|AAF68380.1| 1017|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1017
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 465 LVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFANDMREQFKTMIKSMD 623
L++ P S + ++ + N L +KRS + I F ND+ +QF T+IK D
Sbjct: 819 LIMPPRSYESATVMFVQICDFNAL-MKRSSPEQVIAFLNDIYDQFDTVIKRHD 870
>Z46241-4|CAA86318.1| 837|Caenorhabditis elegans Hypothetical
protein C38D4.5 protein.
Length = 837
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -1
Query: 489 SSTPERAPKVRSFCIFQPDLPCTKAKLLPRKLRPIRTERTQQLYSSFRHDSARLVFRPRK 310
S+TP+R + F P C + + P+RT R L S + A V +P+K
Sbjct: 351 SNTPDRPILMEDSADFTPSSRCEERRGSGDGREPVRTIRCGDLERSENDEPAEKVVKPKK 410
>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
protein 104, isoforma protein.
Length = 1584
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 453 RSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFAN 581
RS L+ S ++ + SN++I+ NL +KRS+S I+ N
Sbjct: 1404 RSSDLLCRQKSKSDQNLASNDDIVDNLGGMKRSLSGSRILQLN 1446
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 453 RSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFAN 581
RS L+ S ++ + SN++I+ NL +KRS+S I+ N
Sbjct: 1448 RSSDLLCRQKSKSDQNLASNDDIVDNLGGMKRSLSGSRILQLN 1490
>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
protein protein.
Length = 1584
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 453 RSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFAN 581
RS L+ S ++ + SN++I+ NL +KRS+S I+ N
Sbjct: 1404 RSSDLLCRQKSKSDQNLASNDDIVDNLGGMKRSLSGSRILQLN 1446
>Z83744-4|CAB06040.4| 735|Caenorhabditis elegans Hypothetical
protein C06A12.4 protein.
Length = 735
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +3
Query: 438 AEICRRSEPLVLSPGSMKEKKMISNENILANLLRVKRSISYETIMFANDMREQFKTMIKS 617
A I + + V++P + I ++ +KR E I F ND+ +QF T+IK
Sbjct: 517 ASIAKDLKNGVIAPARSYASATVMFVQICDFIVILKRRPPKEVIGFLNDIFDQFDTVIKR 576
Query: 618 MD 623
D
Sbjct: 577 HD 578
>Z81459-1|CAB03827.3| 731|Caenorhabditis elegans Hypothetical
protein C03H12.1 protein.
Length = 731
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 318 VEKLILLSRVEKNYIIAGFSLFLLVVTFAVKALLSYTASLAEICRRSEPLVLSPGSMK 491
+ + + EKN I+ + LLV T A+ ++ +L + S PLV+S G+ K
Sbjct: 64 IAQAVARRNTEKNRILRDCGV-LLVATAALAIMIYLLLTLLGLSMPSRPLVVSKGAAK 120
>Z79604-6|CAB97241.2| 731|Caenorhabditis elegans Hypothetical
protein C03H12.1 protein.
Length = 731
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = +3
Query: 318 VEKLILLSRVEKNYIIAGFSLFLLVVTFAVKALLSYTASLAEICRRSEPLVLSPGSMK 491
+ + + EKN I+ + LLV T A+ ++ +L + S PLV+S G+ K
Sbjct: 64 IAQAVARRNTEKNRILRDCGV-LLVATAALAIMIYLLLTLLGLSMPSRPLVVSKGAAK 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,315,347
Number of Sequences: 27780
Number of extensions: 316304
Number of successful extensions: 706
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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