Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1e03
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025468-4|AAB71045.1|  449|Caenorhabditis elegans Hypothetical ...    64   1e-10
AL021481-5|CAA16336.2|  455|Caenorhabditis elegans Hypothetical ...    58   9e-09
Z11505-1|CAA77582.1|  460|Caenorhabditis elegans Hypothetical pr...    56   2e-08
U28928-5|AAQ01535.1|  434|Caenorhabditis elegans Hypothetical pr...    51   1e-06
U28928-4|AAA68337.2|  489|Caenorhabditis elegans Hypothetical pr...    51   1e-06
AL031630-22|CAA20995.2|  454|Caenorhabditis elegans Hypothetical...    38   0.010
AL021474-3|CAD54163.1|  519|Caenorhabditis elegans Hypothetical ...    30   1.6  
AF003136-3|AAO38651.1|  352|Caenorhabditis elegans Hypothetical ...    30   1.6  
AF003136-2|AAK93851.1|  468|Caenorhabditis elegans Hypothetical ...    30   1.6  
U80842-2|AAB37948.1|  322|Caenorhabditis elegans Serpentine rece...    28   8.4  

>AF025468-4|AAB71045.1|  449|Caenorhabditis elegans Hypothetical
           protein T27A1.5 protein.
          Length = 449

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 30/113 (26%), Positives = 61/113 (53%)
 Frame = +3

Query: 423 ESTAYLIKGFFGAGILNVHVAYMFAGLWTSLVVTFVMGGIICRCMMLLVKSAHKMYVLLR 602
           ++  ++IK   G G+L++ +A+  +G+W  L++   +  I   C   L+   H +  + R
Sbjct: 43  QALIHMIKVMMGTGMLSLPLAFKHSGIWLGLILLCFICLICIYCTRQLIFGQHYITFIKR 102

Query: 603 VPRLTYADLVEAVVAIGPLKKLRNYSKTLRYFVDICLFVQMCGTCCIYEIIIA 761
             R+ YA+++ + V +GP   +R +    +  V+I +FV   G CC+Y + +A
Sbjct: 103 EQRMDYANVMRSAVELGP-AWIRGHGYLFKQMVNINMFVAQFGFCCVYFVFMA 154


>AL021481-5|CAA16336.2|  455|Caenorhabditis elegans Hypothetical
           protein Y43F4B.7 protein.
          Length = 455

 Score = 57.6 bits (133), Expect = 9e-09
 Identities = 32/111 (28%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
 Frame = +3

Query: 435 YLIKGFFGAGILNVHVAYMFAGLWTSLVVTFVMGGIICRCMMLLVKSAHKMYVLLRVPR- 611
           +++K   G G+L++ +A+  +GL+  L++T ++  I   CM  +V +AH  +V  R  R 
Sbjct: 57  HMVKAMLGTGLLSLPLAFKHSGLFLGLILTVLICLICLYCMRQVVFAAH--FVCNRNGRD 114

Query: 612 -LTYADLVEAVVAIGPLKKLRNYSKTLRYFVDICLFVQMCGTCCIYEIIIA 761
            + YA+++   V +GP    RN     +  V++ +F+   G CC+Y + +A
Sbjct: 115 LIDYANIMRGAVEMGPPWIKRN-GYFFKQLVNVNMFISQLGFCCVYFVFMA 164


>Z11505-1|CAA77582.1|  460|Caenorhabditis elegans Hypothetical
           protein F59B2.2 protein.
          Length = 460

 Score = 56.4 bits (130), Expect = 2e-08
 Identities = 30/108 (27%), Positives = 52/108 (48%)
 Frame = +3

Query: 438 LIKGFFGAGILNVHVAYMFAGLWTSLVVTFVMGGIICRCMMLLVKSAHKMYVLLRVPRLT 617
           L K  F AG  ++  A+   GLW S V++FV+ G+      +LV+++  +        L 
Sbjct: 46  LSKSMFNAGCFSLPYAWKLGGLWVSFVMSFVIAGLNWYGNHILVRASQHLAKKSDRSALD 105

Query: 618 YADLVEAVVAIGPLKKLRNYSKTLRYFVDICLFVQMCGTCCIYEIIIA 761
           Y    + V     ++ LRN SK + YFV++ +     G C +  + I+
Sbjct: 106 YGHFAKKVCDYSDIRFLRNNSKAVMYFVNVTILFYQLGMCSVAILFIS 153


>U28928-5|AAQ01535.1|  434|Caenorhabditis elegans Hypothetical
           protein C44B7.6b protein.
          Length = 434

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
 Frame = +3

Query: 438 LIKGFFGAGILNVHVAYMFAGLWTSLVVTFVMGGIICRCMMLLVKSAHKMYVLLRVPRLT 617
           L+KG  GAG  +V +A+  +G  + LV+  V+G +   CM+ LVK A  +  + +   L 
Sbjct: 30  LMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSKVNQSAPLD 89

Query: 618 YADLV--EAVVAIGPLKKLRNYSKTLRYFVDICLFVQMCGTCCIYEIII 758
           Y ++       +  P++KL   S+ L   V+  L +   G CC + I +
Sbjct: 90  YGNMAYKATQASYTPIRKLAPVSRAL---VNSSLCILQLGICCCFYIFV 135


>U28928-4|AAA68337.2|  489|Caenorhabditis elegans Hypothetical
           protein C44B7.6a protein.
          Length = 489

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
 Frame = +3

Query: 438 LIKGFFGAGILNVHVAYMFAGLWTSLVVTFVMGGIICRCMMLLVKSAHKMYVLLRVPRLT 617
           L+KG  GAG  +V +A+  +G  + LV+  V+G +   CM+ LVK A  +  + +   L 
Sbjct: 85  LMKGMLGAGCFSVPLAFKQSGYVSGLVIIVVLGFLCALCMIKLVKCAGYLSKVNQSAPLD 144

Query: 618 YADLV--EAVVAIGPLKKLRNYSKTLRYFVDICLFVQMCGTCCIYEIII 758
           Y ++       +  P++KL   S+ L   V+  L +   G CC + I +
Sbjct: 145 YGNMAYKATQASYTPIRKLAPVSRAL---VNSSLCILQLGICCCFYIFV 190


>AL031630-22|CAA20995.2|  454|Caenorhabditis elegans Hypothetical
           protein Y38H6C.17 protein.
          Length = 454

 Score = 37.5 bits (83), Expect = 0.010
 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
 Frame = +3

Query: 447 GFFGAGILNVHVAYMFAGLWTSLVVTFVMGGIICRCMMLLVKSAHKMYVLLRVPRLTYAD 626
           G  G G  ++ V++  AGLW      F++GG+    M  +V  +  +       +L Y +
Sbjct: 47  GMMGPGCFSLAVSFKQAGLWGGFASVFIIGGLSLYSMHKIVNCSQFLSEKKGDQKLDYGE 106

Query: 627 LVEAVV--AIGPLKKLRNYSKTLRYFVDICLFVQMCGTCCI 743
           + ++ +  + G  KK   Y K  +  V+ CL     G   +
Sbjct: 107 MAKSAMENSYGWAKK---YGKIAKVVVNTCLLAFQLGVITV 144


>AL021474-3|CAD54163.1|  519|Caenorhabditis elegans Hypothetical
           protein Y32F6A.4 protein.
          Length = 519

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +3

Query: 399 SPLLYNLFESTAYLIKGFFGAGILNVHVAYMFAGLWTSLVVTFVMGGII 545
           +P   N F +  +++    G GI+ +  A + A  WT L+V  ++ G++
Sbjct: 51  NPAGLNWFVTGLFVVGDLAGGGIVALPTAIIQAEFWTGLIVCVILIGVV 99


>AF003136-3|AAO38651.1|  352|Caenorhabditis elegans Hypothetical
           protein F28B3.5b protein.
          Length = 352

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +3

Query: 594 LLRVPRLTYADL--VEAVVAIGPLKKLRNYSKTLRYFVDICLFVQMCGTCCIY 746
           L+RV  L Y+ +  + +V +I   +KL N  K    F  IC FV +    C++
Sbjct: 138 LIRVKALKYSQIAILLSVFSIAVTEKLSNSLKNFPIFQGICFFVAILSFICLW 190


>AF003136-2|AAK93851.1|  468|Caenorhabditis elegans Hypothetical
           protein F28B3.5a protein.
          Length = 468

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +3

Query: 594 LLRVPRLTYADL--VEAVVAIGPLKKLRNYSKTLRYFVDICLFVQMCGTCCIY 746
           L+RV  L Y+ +  + +V +I   +KL N  K    F  IC FV +    C++
Sbjct: 138 LIRVKALKYSQIAILLSVFSIAVTEKLSNSLKNFPIFQGICFFVAILSFICLW 190


>U80842-2|AAB37948.1|  322|Caenorhabditis elegans Serpentine
           receptor, class i protein51 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = +3

Query: 513 LVVTFVMGGIICRCMMLLVKSAHKMYVLLRVPR 611
           ++V F++ G I   +++   S +K Y+L ++PR
Sbjct: 277 IIVLFLLRGSIHSVILIATTSPYKKYILRKIPR 309


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,478,863
Number of Sequences: 27780
Number of extensions: 332490
Number of successful extensions: 856
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)