Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1e02
         (104 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   2.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   2.7  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    19   3.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    18   8.3  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    18   8.3  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 39   SLFMFCHLRDFVV 1
            SLF FC   +F++
Sbjct: 978  SLFFFCMAAEFII 990


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 39   SLFMFCHLRDFVV 1
            SLF FC   +F++
Sbjct: 978  SLFFFCMAAEFII 990


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 48  HSYQFYRNAEVKTLILK 98
           H +  +RNAE+   +LK
Sbjct: 89  HIFDLHRNAEIYPDLLK 105


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B
          protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = -3

Query: 75 QRFCKIGMNGFFSLFMFCH 19
          QR+  I     F  F  CH
Sbjct: 5  QRYLLIATAALFLFFDLCH 23


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A
          protein.
          Length = 717

 Score = 18.2 bits (35), Expect = 8.3
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = -3

Query: 75 QRFCKIGMNGFFSLFMFCH 19
          QR+  I     F  F  CH
Sbjct: 5  QRYLLIATAALFLFFDLCH 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,366
Number of Sequences: 336
Number of extensions: 160
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 15
effective length of database: 117,545
effective search space used:  2233355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)