Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1d24
(540 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029028-1|ABJ16961.1| 677|Drosophila melanogaster HL01122p pro... 29 4.1
AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night... 29 4.1
AE014298-3220|ABI31006.1| 1470|Drosophila melanogaster CG40500-P... 29 4.1
AE014298-3219|ABI31005.1| 1626|Drosophila melanogaster CG40500-P... 29 4.1
AE014298-3218|EAL24565.1| 1741|Drosophila melanogaster CG40500-P... 29 4.1
AE014298-3217|ABI31004.1| 1513|Drosophila melanogaster CG40500-P... 29 4.1
AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-P... 29 4.1
AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo pro... 29 4.1
BT023500-1|AAY84900.1| 1203|Drosophila melanogaster LD29862p pro... 29 5.4
AE014298-1515|AAF47967.1| 1128|Drosophila melanogaster CG2186-PA... 29 5.4
AY118589-1|AAM49958.1| 941|Drosophila melanogaster LD45221p pro... 28 7.1
AE014297-107|ABI31132.1| 378|Drosophila melanogaster CG41466-PA... 28 7.1
AE013599-3618|AAF47019.2| 941|Drosophila melanogaster CG5360-PA... 28 7.1
>BT029028-1|ABJ16961.1| 677|Drosophila melanogaster HL01122p
protein.
Length = 677
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 98 RFRATSPTRRPKRCRDKEREREAEKFNVNTE 190
R R R R RD++RER+ E+F++ T+
Sbjct: 311 RQRTRDQARERSRERDRDRERDRERFSIATD 341
>AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night
protein protein.
Length = 3579
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 187 GVEQLARCNLGLSAGTKLVHETDSLARESAPDGRSKTTSSRTESFSAA 330
G + R N+G+SA + T + DG+ + TS+ T ++++A
Sbjct: 3101 GYDTTTRRNIGISASSTTSRSTAKTSSSPYSDGQLRQTSTSTSNYNSA 3148
>AE014298-3220|ABI31006.1| 1470|Drosophila melanogaster CG40500-PD,
isoform D protein.
Length = 1470
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 98 RFRATSPTRRPKRCRDKEREREAEKFNVNTE 190
R R R R RD++RER+ E+F++ T+
Sbjct: 1104 RQRTRDQARERSRERDRDRERDRERFSIATD 1134
>AE014298-3219|ABI31005.1| 1626|Drosophila melanogaster CG40500-PB,
isoform B protein.
Length = 1626
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 98 RFRATSPTRRPKRCRDKEREREAEKFNVNTE 190
R R R R RD++RER+ E+F++ T+
Sbjct: 1104 RQRTRDQARERSRERDRDRERDRERFSIATD 1134
>AE014298-3218|EAL24565.1| 1741|Drosophila melanogaster CG40500-PA,
isoform A protein.
Length = 1741
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 98 RFRATSPTRRPKRCRDKEREREAEKFNVNTE 190
R R R R RD++RER+ E+F++ T+
Sbjct: 1104 RQRTRDQARERSRERDRDRERDRERFSIATD 1134
>AE014298-3217|ABI31004.1| 1513|Drosophila melanogaster CG40500-PC,
isoform C protein.
Length = 1513
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 98 RFRATSPTRRPKRCRDKEREREAEKFNVNTE 190
R R R R RD++RER+ E+F++ T+
Sbjct: 1104 RQRTRDQARERSRERDRDRERDRERFSIATD 1134
>AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-PA
protein.
Length = 3574
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 187 GVEQLARCNLGLSAGTKLVHETDSLARESAPDGRSKTTSSRTESFSAA 330
G + R N+G+SA + T + DG+ + TS+ T ++++A
Sbjct: 3101 GYDTTTRRNIGISASSTTSRSTAKTSSSPYSDGQLRQTSTSTSNYNSA 3148
>AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo protein.
Length = 3575
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 187 GVEQLARCNLGLSAGTKLVHETDSLARESAPDGRSKTTSSRTESFSAA 330
G + R N+G+SA + T + DG+ + TS+ T ++++A
Sbjct: 3102 GYDTTTRRNIGISASSTTSRSTAKTSSSPYSDGQLRQTSTSTSNYNSA 3149
>BT023500-1|AAY84900.1| 1203|Drosophila melanogaster LD29862p
protein.
Length = 1203
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 98 RFRATSPTRRPKRCRDKEREREAEK 172
R R+ SP +R +R R++ERERE ++
Sbjct: 726 RGRSYSPVKRVERERERERERERDR 750
>AE014298-1515|AAF47967.1| 1128|Drosophila melanogaster CG2186-PA
protein.
Length = 1128
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 98 RFRATSPTRRPKRCRDKEREREAEK 172
R R+ SP +R +R R++ERERE ++
Sbjct: 651 RGRSYSPVKRVERERERERERERDR 675
>AY118589-1|AAM49958.1| 941|Drosophila melanogaster LD45221p
protein.
Length = 941
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 393 RLSQS*DRTEGILKMNIGLLVSCTEALSPAASCLGTPIRGGLSR 262
+L+Q T G ++++GL S + ++PA+ GTP+ L R
Sbjct: 625 KLAQHAAATPGQTRLSLGLSGSSSNLVNPASFASGTPLASKLHR 668
>AE014297-107|ABI31132.1| 378|Drosophila melanogaster CG41466-PA
protein.
Length = 378
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 122 RRPKRCRDKERERE 163
+ P RCRD+ERERE
Sbjct: 203 KNPDRCRDRERERE 216
>AE013599-3618|AAF47019.2| 941|Drosophila melanogaster CG5360-PA
protein.
Length = 941
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -1
Query: 393 RLSQS*DRTEGILKMNIGLLVSCTEALSPAASCLGTPIRGGLSR 262
+L+Q T G ++++GL S + ++PA+ GTP+ L R
Sbjct: 625 KLAQHAAATPGQTRLSLGLSGSSSNLVNPASFASGTPLASKLHR 668
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,925,574
Number of Sequences: 53049
Number of extensions: 383107
Number of successful extensions: 1652
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -