Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1d22
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. 32 0.45
AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstrea... 32 0.45
Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical pr... 31 0.59
AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein. 31 0.59
Z49937-8|CAD44113.1| 546|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z49867-4|CAD44109.1| 546|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z68750-2|CAA92967.2| 451|Caenorhabditis elegans Hypothetical pr... 29 2.4
U53155-10|AAC48271.1| 346|Caenorhabditis elegans Seven tm recep... 29 2.4
AF016450-9|AAB65987.3| 295|Caenorhabditis elegans Serpentine re... 29 3.2
Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical pr... 29 4.2
AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor typ... 29 4.2
Z48009-8|CAA88081.1| 329|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 28 5.5
AF016450-6|AAB65982.1| 311|Caenorhabditis elegans Serpentine re... 28 5.5
Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical p... 28 7.3
Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical ... 28 7.3
AF022983-6|AAK82916.1| 376|Caenorhabditis elegans Hypothetical ... 28 7.3
U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical pr... 27 9.6
>AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein.
Length = 481
Score = 31.9 bits (69), Expect = 0.45
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 477 EDTSAQNLETARSLVSALLQQINFRPRERIKRK-SIKGRSQIKRFQKNTDNWRR 635
++ Q +E +L ALLQQ R RER+K K G + K+ KN + RR
Sbjct: 391 KELEEQPVEQEDALRQALLQQREIRMRERLKEKMKASGAEKDKKRDKNKTSRRR 444
>AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstream,
human gene xe7related protein 7 protein.
Length = 495
Score = 31.9 bits (69), Expect = 0.45
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 477 EDTSAQNLETARSLVSALLQQINFRPRERIKRK-SIKGRSQIKRFQKNTDNWRR 635
++ Q +E +L ALLQQ R RER+K K G + K+ KN + RR
Sbjct: 391 KELEEQPVEQEDALRQALLQQREIRMRERLKEKMKASGAEKDKKRDKNKTSRRR 444
>Z93382-9|CAB07615.2| 462|Caenorhabditis elegans Hypothetical
protein F45G2.6 protein.
Length = 462
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -2
Query: 532 NRAETRLLAVSRFCAEVSSPQLLWILFILDTFVYAGTIGNNSPILDVGFI 383
N +TR+L+ + C E+ PQL+W + L G ++ I V F+
Sbjct: 244 NDRQTRILSAAETCTEMFGPQLIWKIDKLQQRTNEAKSGADTTIFSVPFM 293
>AF348168-1|AAK37546.1| 462|Caenorhabditis elegans TRF-1 protein.
Length = 462
Score = 31.5 bits (68), Expect = 0.59
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -2
Query: 532 NRAETRLLAVSRFCAEVSSPQLLWILFILDTFVYAGTIGNNSPILDVGFI 383
N +TR+L+ + C E+ PQL+W + L G ++ I V F+
Sbjct: 244 NDRQTRILSAAETCTEMFGPQLIWKIDKLQQRTNEAKSGADTTIFSVPFM 293
>Z49937-8|CAD44113.1| 546|Caenorhabditis elegans Hypothetical
protein C33D3.5 protein.
Length = 546
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 372 FNATMK-PTSSIGELFPIVPAYTNVSRINNIHSNCGEDTSAQNLETA 509
FN T+ P + ++ P VPA T S +N+I + SA NL+ A
Sbjct: 77 FNNTVPLPQNEFWKVLPFVPASTFFSAVNDIQNQLINQNSAFNLDNA 123
>Z49867-4|CAD44109.1| 546|Caenorhabditis elegans Hypothetical
protein C33D3.5 protein.
Length = 546
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 372 FNATMK-PTSSIGELFPIVPAYTNVSRINNIHSNCGEDTSAQNLETA 509
FN T+ P + ++ P VPA T S +N+I + SA NL+ A
Sbjct: 77 FNNTVPLPQNEFWKVLPFVPASTFFSAVNDIQNQLINQNSAFNLDNA 123
>Z68750-2|CAA92967.2| 451|Caenorhabditis elegans Hypothetical
protein K01A6.6 protein.
Length = 451
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 317 FLMVYNRRTIRICEVTTFVRCLWFIYQVIFVVVSLTDMSSF 195
FL Y+R T+++ V F R +W I IFV V+L + F
Sbjct: 183 FLTQYHRNTLKLRTVERFSRAIWVI---IFVCVTLAILRFF 220
>U53155-10|AAC48271.1| 346|Caenorhabditis elegans Seven tm receptor
protein 139 protein.
Length = 346
Score = 29.5 bits (63), Expect = 2.4
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 5/101 (4%)
Frame = -1
Query: 506 CFQILRRSIFTAITMDIIYSRYICVCWYYRK*FTNTRCRFHSCIKDPKVCFSCF---IDF 336
C S+ TA+ + RYI VC R +F IK K+CF + F
Sbjct: 91 CLFCAAYSLMTALLATQFFYRYIVVC----------RPQFLHHIKGYKLCFIFLPGVVIF 140
Query: 335 FLWYFT--FLMVYNRRTIRICEVTTFVRCLWFIYQVIFVVV 219
FLWY F M + + C +Q++FV +
Sbjct: 141 FLWYLNVHFGMKKTLEKAKFSQEVILKNCEEDTFQIVFVAL 181
>AF016450-9|AAB65987.3| 295|Caenorhabditis elegans Serpentine
receptor, class t protein69 protein.
Length = 295
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -1
Query: 242 YQVIFVVVSLTDMSSFIIVVK-IRNSDDQ-VRAFINLMNLIRF 120
Y +IF+ +S + FI+++K + N D Q LMNLI F
Sbjct: 4 YGIIFLALSAPTIPIFIVIMKAVLNKDKQSANVTYKLMNLINF 46
>Z82288-6|CAB05325.1| 1112|Caenorhabditis elegans Hypothetical protein
ZK896.8 protein.
Length = 1112
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +3
Query: 120 KTYQVHQINESAYLVIAVPDFNDNNETRHVSET 218
K+Y+V I ++ +V +P+ N+ N +R+++ T
Sbjct: 957 KSYKVETIGDAYMVVSGIPEENEYNHSRNIANT 989
>AB201389-1|BAE78829.1| 1113|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1113
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +3
Query: 120 KTYQVHQINESAYLVIAVPDFNDNNETRHVSET 218
K+Y+V I ++ +V +P+ N+ N +R+++ T
Sbjct: 958 KSYKVETIGDAYMVVSGIPEENEYNHSRNIANT 990
>Z48009-8|CAA88081.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.11 protein.
Length = 329
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = -1
Query: 362 VCFSCFIDFFLWYFTFLMVYNRRTIRICEVTTFVRCLWFIYQVIFVVVSLTDMSSFIIVV 183
+CF F+ F + ++ +TIR + T+ R +FI + + + + ++V
Sbjct: 238 ICFLTFVQFIFMFIYSFGIFTLKTIR--SMLTY-RQYYFIVVWFYTIPFIAALFPILLVY 294
Query: 182 KIRNS 168
+IR+S
Sbjct: 295 RIRSS 299
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1
Query: 362 VCFSCFIDFFLWYFTFLMVYN 300
VCFS FI FFL F FL + N
Sbjct: 4 VCFSIFICFFLSSFLFLTLVN 24
>AF016450-6|AAB65982.1| 311|Caenorhabditis elegans Serpentine
receptor, class t protein67 protein.
Length = 311
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -1
Query: 275 VTTFVRCLWFIYQ-VIFVVVSLTDMSSF 195
VTT++ CL ++ VIF +VS DM+ F
Sbjct: 229 VTTYMACLVVVWHPVIFTMVSFIDMTKF 256
>Z81593-12|CAB04744.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Frame = +3
Query: 426 PAYTNVSRINNIH---SNCGE--DTSAQNLETARSLVSALLQQI 542
P Y NV+ + H ++C S QNLE +RSL L QQ+
Sbjct: 810 PVYDNVALSRHAHMAIASCAAVITESTQNLEKSRSLAKKLAQQL 853
>Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical
protein F55C10.4 protein.
Length = 517
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 42 MLYSTPKYILLVKFILSSFTCLTFCF 119
M+ P+Y L FI+ +F C+TFCF
Sbjct: 1 MIPRLPRYFLKY-FIIFTFFCVTFCF 25
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
protein F40F11.2b protein.
Length = 1607
Score = 27.9 bits (59), Expect = 7.3
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Frame = +3
Query: 249 PKTSYKGS-NFTNPY--SSSIINHQKGKI-PQEEINKARETYFRIFNATMKPTSSIGELF 416
P TSY + NP SSS INHQ+G I PQ + A+ + K T++
Sbjct: 166 PSTSYMPQIDHMNPSGNSSSQINHQQGMIVPQVQQQPAKPKTTKKRPPPKKKTAAQAP-D 224
Query: 417 PIVPAYTNVSRINNIHSNCGEDTSAQNLETARSL-----VSALLQQINFRPRER 563
+ T V+++ N D Q +ET S VSALL +++ +E+
Sbjct: 225 TVGTVLTKVNKLTQQIDN-NNDNQEQKIETRISAEDLVRVSALLSRLDVYQKEQ 277
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
protein F40F11.2a protein.
Length = 1593
Score = 27.9 bits (59), Expect = 7.3
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Frame = +3
Query: 249 PKTSYKGS-NFTNPY--SSSIINHQKGKI-PQEEINKARETYFRIFNATMKPTSSIGELF 416
P TSY + NP SSS INHQ+G I PQ + A+ + K T++
Sbjct: 152 PSTSYMPQIDHMNPSGNSSSQINHQQGMIVPQVQQQPAKPKTTKKRPPPKKKTAAQAP-D 210
Query: 417 PIVPAYTNVSRINNIHSNCGEDTSAQNLETARSL-----VSALLQQINFRPRER 563
+ T V+++ N D Q +ET S VSALL +++ +E+
Sbjct: 211 TVGTVLTKVNKLTQQIDN-NNDNQEQKIETRISAEDLVRVSALLSRLDVYQKEQ 263
>AL023822-2|CAA19440.1| 1274|Caenorhabditis elegans Hypothetical
protein Y102A5A.1 protein.
Length = 1274
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Frame = +3
Query: 426 PAYTNVSRINNIH---SNCGE--DTSAQNLETARSLVSALLQQI 542
P Y NV+ + H ++C S QNLE +RSL L QQ+
Sbjct: 810 PVYDNVALSRHAHMAIASCAAVITESTQNLEKSRSLAKKLAQQL 853
>AF022983-6|AAK82916.1| 376|Caenorhabditis elegans Hypothetical
protein R13D11.3 protein.
Length = 376
Score = 27.9 bits (59), Expect = 7.3
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 6/118 (5%)
Frame = -1
Query: 494 LRRSIFTAITMDIIYSRYICVCWYYRK*FTNTRCRFHS-CIKDPKVCFSCFIDFFLWYFT 318
L+ I +T+ I SR I + ++ + HS + + F+ F DF WY T
Sbjct: 169 LQLKISATVTVGIALSRNIAL--FFPAFYRRMDQELHSNAVIAAALIFAIFDDFLYWYTT 226
Query: 317 FLMVY-NRRTIRICEVTTFVRCLWFIYQVIF----VVVSLTDMSSFIIVVKIRNSDDQ 159
+ + N TI C V+ R W I ++ V +S+T +V K R+S Q
Sbjct: 227 TIEHHINCGTIG-CFVSDQFRYYWGISNMVLGFIAVFLSITIFWKLNLVSKDRDSIQQ 283
>U64836-4|AAG24059.1| 417|Caenorhabditis elegans Hypothetical
protein F10G2.3 protein.
Length = 417
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/47 (23%), Positives = 20/47 (42%)
Frame = +3
Query: 63 YILLVKFILSSFTCLTFCFKTYQVHQINESAYLVIAVPDFNDNNETR 203
Y F+++ TC FC +H NE+ Y++ + + R
Sbjct: 172 YYAEASFVVAQNTCEQFCGDLATIHTANENRYILTVAQHYPSSTIVR 218
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,364,423
Number of Sequences: 27780
Number of extensions: 252402
Number of successful extensions: 810
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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