Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1d19
         (457 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple ...    30   3.3  
AL355178-2|CAI23435.1|  426|Homo sapiens CUB and Sushi multiple ...    30   3.3  
AL355178-1|CAI23434.1| 1167|Homo sapiens CUB and Sushi multiple ...    30   3.3  
AL161643-1|CAI23498.1| 1167|Homo sapiens CUB and Sushi multiple ...    30   3.3  
AK127722-1|BAC87101.1| 1167|Homo sapiens protein ( Homo sapiens ...    30   3.3  
AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.        30   3.3  

>AY210418-1|AAO34701.1| 3487|Homo sapiens CUB and sushi multiple
            domains 2 protein.
          Length = 3487

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 227  ISIRNGPYEQ*RAYGEFNWSRLRNTL 304
            I IRNGPYE  R  G F+ S L ++L
Sbjct: 2022 IEIRNGPYETSRMMGRFSGSELPSSL 2047


>AL355178-2|CAI23435.1|  426|Homo sapiens CUB and Sushi multiple
           domains 2 protein.
          Length = 426

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 227 ISIRNGPYEQ*RAYGEFNWSRLRNTL 304
           I IRNGPYE  R  G F+ S L ++L
Sbjct: 161 IEIRNGPYETSRMMGRFSGSELPSSL 186


>AL355178-1|CAI23434.1| 1167|Homo sapiens CUB and Sushi multiple
            domains 2 protein.
          Length = 1167

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 227  ISIRNGPYEQ*RAYGEFNWSRLRNTL 304
            I IRNGPYE  R  G F+ S L ++L
Sbjct: 935  IEIRNGPYETSRMMGRFSGSELPSSL 960


>AL161643-1|CAI23498.1| 1167|Homo sapiens CUB and Sushi multiple
            domains 2 protein.
          Length = 1167

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 227  ISIRNGPYEQ*RAYGEFNWSRLRNTL 304
            I IRNGPYE  R  G F+ S L ++L
Sbjct: 935  IEIRNGPYETSRMMGRFSGSELPSSL 960


>AK127722-1|BAC87101.1| 1167|Homo sapiens protein ( Homo sapiens cDNA
            FLJ45822 fis, clone NT2RP8001604, moderately  similar to
            Homo sapiens CUB and Sushi multiple domains 1 (CSMD1). ).
          Length = 1167

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 227  ISIRNGPYEQ*RAYGEFNWSRLRNTL 304
            I IRNGPYE  R  G F+ S L ++L
Sbjct: 935  IEIRNGPYETSRMMGRFSGSELPSSL 960


>AB212622-1|BAD97692.1| 3631|Homo sapiens CSMD2 protein protein.
          Length = 3631

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +2

Query: 227  ISIRNGPYEQ*RAYGEFNWSRLRNTL 304
            I IRNGPYE  R  G F+ S L ++L
Sbjct: 2062 IEIRNGPYETSRMMGRFSGSELPSSL 2087


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,098,000
Number of Sequences: 237096
Number of extensions: 941455
Number of successful extensions: 936
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)