Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte1d16
(697 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0219 - 1651833-1651987,1652172-1652471,1652889-1652967,165... 69 5e-12
11_01_0217 - 1698721-1698875,1699122-1699421,1699840-1699918,169... 69 5e-12
01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791... 62 3e-10
05_01_0120 - 828834-831143 61 7e-10
01_03_0017 + 11677029-11677100,11677992-11678030,11678169-116783... 57 1e-08
10_08_0930 - 21641818-21642240,21642731-21642820,21642902-216429... 56 4e-08
06_01_0372 + 2684208-2684390,2684867-2684968,2685197-2685290,268... 49 3e-06
01_06_0649 + 30861946-30862179,30862702-30862824,30863104-308631... 49 4e-06
06_02_0081 - 11527339-11527652,11528166-11528272,11528361-115284... 47 2e-05
01_04_0135 - 16494605-16494618,16494676-16494829 46 3e-05
05_06_0131 - 25888434-25888931,25889105-25889155,25889249-258893... 44 9e-05
11_01_0077 - 602192-602395,602477-602647,603161-603366,605457-60... 44 2e-04
12_01_0078 - 639421-639624,639706-639876,640392-640597,640985-64... 42 5e-04
02_05_0549 + 29900714-29900953,29902224-29902323,29902578-299027... 36 0.010
12_01_0584 - 4762476-4762613,4763986-4764075,4765048-4765146,476... 30 1.5
11_01_0730 - 6037375-6037509,6037892-6038019,6038339-6038423,603... 30 2.0
08_02_0082 + 12059692-12060209,12060484-12060973 28 6.2
03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009 28 6.2
02_05_0352 + 28240913-28241362 28 6.2
08_01_0029 - 216526-216621,216706-216854,217489-217594,218650-21... 28 8.1
04_04_1085 - 30719921-30719960,30720206-30720351,30720469-307205... 28 8.1
01_06_1449 - 37444769-37446190 28 8.1
>12_01_0219 -
1651833-1651987,1652172-1652471,1652889-1652967,
1653047-1653111,1653236-1653288,1653666-1654084
Length = 356
Score = 68.5 bits (160), Expect = 5e-12
Identities = 38/91 (41%), Positives = 53/91 (58%)
Frame = +2
Query: 425 VPRHFVPLLDTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWQ 604
V R VPL DT ++L +++ D I+E G V LVHC AGVSRS T+ +AYL++ +
Sbjct: 94 VTRMAVPLRDTEEENLLDHLEPCLDFIDEGRKEGNV-LVHCFAGVSRSATIIVAYLMRTE 152
Query: 605 KMTLRDAYHYLKIRRPQIRPNTGFFKQLIKF 697
+ +L +A LK PN GF +QL F
Sbjct: 153 QKSLEEALESLKEVNESACPNDGFLEQLKLF 183
>11_01_0217 -
1698721-1698875,1699122-1699421,1699840-1699918,
1699998-1700062,1700187-1700239,1700654-1701072
Length = 356
Score = 68.5 bits (160), Expect = 5e-12
Identities = 38/91 (41%), Positives = 53/91 (58%)
Frame = +2
Query: 425 VPRHFVPLLDTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWQ 604
V R VPL DT ++L +++ D I+E G V LVHC AGVSRS T+ +AYL++ +
Sbjct: 94 VTRMAVPLRDTEEENLLDHLEPCLDFIDEGRKEGNV-LVHCFAGVSRSATIIVAYLMRTE 152
Query: 605 KMTLRDAYHYLKIRRPQIRPNTGFFKQLIKF 697
+ +L +A LK PN GF +QL F
Sbjct: 153 QKSLEEALESLKEVNESACPNDGFLEQLKLF 183
>01_03_0205 + 13777918-13778015,13778402-13778624,13779022-13779198,
13779277-13779437,13779520-13780519,13780923-13781069,
13781149-13781376,13781471-13781628,13781807-13782161
Length = 848
Score = 62.5 bits (145), Expect = 3e-10
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Frame = +2
Query: 302 SRVTNLVYVCGAHALPGAVRVLHPGL--IVSXXXXXXXXXXDYVPRHF----VPLLDTPN 463
S++T+ +Y+ GA A + H G+ ++ P F + D N
Sbjct: 625 SQITDYLYIGGALAARSTYTLKHLGITHVLCLCANEIGQAESQQPDRFDYQNFSINDDEN 684
Query: 464 SDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWQKMTLRDAYHYLKI 643
+D+ +D I+ V G VLVHC G SRS T+ LAYL+ +K TL +A++ LK
Sbjct: 685 ADISDVFQDASDFIDYVQHLHGKVLVHCFEGKSRSATVVLAYLMLRKKFTLLEAWNMLKK 744
Query: 644 RRPQIRPNTGFFKQLI 691
+ PN GF K L+
Sbjct: 745 VHRRAHPNDGFAKVLL 760
>05_01_0120 - 828834-831143
Length = 769
Score = 61.3 bits (142), Expect = 7e-10
Identities = 32/83 (38%), Positives = 45/83 (54%)
Frame = +2
Query: 446 LLDTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWQKMTLRDA 625
L D+P D+ + V D +V GG V VHC GVSRS +L +AYL+ + + DA
Sbjct: 197 LQDSPTEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDA 256
Query: 626 YHYLKIRRPQIRPNTGFFKQLIK 694
+ +K R PN GF QL++
Sbjct: 257 FQLVKAARGIANPNMGFACQLLQ 279
>01_03_0017 +
11677029-11677100,11677992-11678030,11678169-11678341,
11679068-11679284,11679518-11679688,11679781-11679941,
11680025-11681069,11681320-11681466,11681547-11681774,
11681863-11682020,11682124-11682493
Length = 926
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +2
Query: 452 DTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWQKMTLRDAYH 631
D ++++ + +D + V GG VLVHC G SRS T+ LAYL+ + +TL A++
Sbjct: 754 DDDDANISDLFEEASDYFDHVDHVGGKVLVHCFEGKSRSATIVLAYLMLRKGLTLAKAWN 813
Query: 632 YLKIRRPQIRPNTGFFKQLI 691
LK + +PN GF K L+
Sbjct: 814 LLKKVHRRAQPNDGFAKALL 833
>10_08_0930 -
21641818-21642240,21642731-21642820,21642902-21642984,
21643512-21643605,21644366-21644488,21644893-21645168
Length = 362
Score = 55.6 bits (128), Expect = 4e-08
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +2
Query: 488 RVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWQKMTLRDAYHYLKIRRPQI 658
R AD I+ G + VHC AG RS T+ L YLV++++MT +AY ++++RRP++
Sbjct: 158 RAADFIHRNALCGKLTYVHCKAGRGRSTTVVLCYLVQYKQMTPAEAYEHVRLRRPRV 214
>06_01_0372 +
2684208-2684390,2684867-2684968,2685197-2685290,
2685450-2685532,2685684-2685773,2686931-2687173
Length = 264
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 440 VPLLDTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWQKMTLR 619
+P D + L + R D I+ + G + +HC AG RS T+ L YLVK++ MT
Sbjct: 104 IPTRDYMFAPSLVDISRAVDFIHRNASCGRMTYIHCKAGRGRSTTIVLCYLVKYKNMTPS 163
Query: 620 DAYHYLKIRRPQI 658
A+ +++ +R ++
Sbjct: 164 TAFEHVRSKRARV 176
>01_06_0649 +
30861946-30862179,30862702-30862824,30863104-30863197,
30863819-30863901,30863984-30864073,30864176-30864562,
30864903-30864991,30867801-30867907,30868431-30868822
Length = 532
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +2
Query: 440 VPLLDTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWQKMTLR 619
+P D + L + + D I+ + GG+ VHC AG RS T+ L YL+K++ M+
Sbjct: 128 IPTRDYLFAPALQDICQAIDFIHRNASEGGITYVHCKAGRGRSTTIVLCYLIKYRSMSPE 187
Query: 620 DAYHYLKIRRPQI 658
A +++ RP++
Sbjct: 188 AALDHVRSIRPRV 200
>06_02_0081 -
11527339-11527652,11528166-11528272,11528361-11528418,
11529240-11529267,11530233-11530499
Length = 257
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +2
Query: 533 VLVHCVAGVSRSVTLCLAYLVKWQKMTLRDAYHYLKIRRPQIRPNTGFFKQLIKF 697
VLVHC++G SRS +A+L+K + L + ++K RRPQ++ +QLI++
Sbjct: 108 VLVHCMSGKSRSAAFVIAFLMKTKGWRLSQCFQWVKERRPQVQLADAAQRQLIEY 162
>01_04_0135 - 16494605-16494618,16494676-16494829
Length = 55
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +2
Query: 566 SVTLCLAYLVKWQKMTLRDAYHYLKIRRPQIRPNTGFFKQLIKF 697
SVT+ +AYL+K +M+L +A ++ +RPQ+ PN GF QL F
Sbjct: 3 SVTIIVAYLMKKHQMSLENALSLVRSKRPQVAPNEGFMSQLENF 46
>05_06_0131 -
25888434-25888931,25889105-25889155,25889249-25889331,
25889733-25889826,25890188-25890310,25890909-25891154
Length = 364
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +2
Query: 434 HFVPLLDTPNSDML--PYMDRVA---DLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVK 598
H + L+ P D L P ++ + D I+ + GG VHC AG RS T+ L YL+K
Sbjct: 125 HGINHLEIPTRDYLFAPSLEDICQAVDFIHRNASQGGSTYVHCKAGRGRSTTIVLCYLIK 184
Query: 599 WQKMT 613
++ MT
Sbjct: 185 YRNMT 189
>11_01_0077 -
602192-602395,602477-602647,603161-603366,605457-605682
Length = 268
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 443 PLLDTPNSDMLPYMDRVADLINEVVTNG-GVVLVHCVAGVSRSVTLCLAYLVKWQKMTLR 619
P +D + + + + ++ G G V VHC AG+ R+ + +AY+ ++ M LR
Sbjct: 144 PAVDFDPDSLRTQLPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVAIAYMFWFENMDLR 203
Query: 620 DAYHYLKIRRP 652
AY L +RP
Sbjct: 204 TAYEKLTSKRP 214
>12_01_0078 -
639421-639624,639706-639876,640392-640597,640985-641100,
641669-641855,642104-642338
Length = 372
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 443 PLLDTPNSDMLPYMDRVADLINEVVTNG-GVVLVHCVAGVSRSVTLCLAYLVKWQKMTLR 619
P +D + + + + ++ G G V VHC AG+ R+ + +AY+ ++ M L+
Sbjct: 248 PAVDFDPDSLRTQLPKAVASLEWAISEGKGRVYVHCTAGLGRAPAVAIAYMFWFENMNLK 307
Query: 620 DAYHYLKIRRP 652
AY L +RP
Sbjct: 308 TAYEKLTSKRP 318
>02_05_0549 +
29900714-29900953,29902224-29902323,29902578-29902719,
29902720-29902826,29903179-29903480
Length = 296
Score = 35.9 bits (79), Expect(2) = 0.010
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +2
Query: 557 VSRSVTLCLAYLVKWQKMTLRDAYHYLKIRRPQIRPNTGFFKQLIKF 697
+SRS + + YL+K + L +Y ++K RRPQ++ QL+++
Sbjct: 159 ISRSAAIVIGYLMKSRGWRLSQSYQWVKDRRPQVQLTDASQNQLVEY 205
Score = 20.6 bits (41), Expect(2) = 0.010
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 533 VLVHCVAGVSR 565
VLVHC++G +R
Sbjct: 123 VLVHCMSGKNR 133
>12_01_0584 -
4762476-4762613,4763986-4764075,4765048-4765146,
4766032-4766154,4766243-4766405,4767307-4767356,
4767826-4767942,4769477-4769683,4769763-4769900,
4771212-4771274,4771358-4771441,4771933-4772084,
4772219-4772357,4772814-4772924
Length = 557
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 521 NGGVVLVHCVAGVSRSVTLCLAYLVKWQKMTLRDAYHYLKIRRP 652
N +LVHC G +R+ + + YL++ Q ++ +A + RRP
Sbjct: 196 NPKYILVHCTHGHNRTGFMIVHYLMRTQLSSVTEALNIFAQRRP 239
>11_01_0730 -
6037375-6037509,6037892-6038019,6038339-6038423,
6038525-6038614,6040015-6040113,6040207-6040335,
6041341-6041463,6041549-6041711,6042331-6042380,
6042593-6042706,6042993-6043199,6043275-6043412,
6044708-6044770,6044845-6044928,6045014-6045094,
6045212-6045363,6045479-6045614,6045991-6046107
Length = 697
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 521 NGGVVLVHCVAGVSRSVTLCLAYLVKWQKMTLRDAYHYLKIRRP 652
N +LVHC G +R+ + + YL++ Q + +A + RRP
Sbjct: 224 NPKYILVHCTHGHNRTGFMIIHYLMRTQVSCVAEAINIFAKRRP 267
>08_02_0082 + 12059692-12060209,12060484-12060973
Length = 335
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/80 (22%), Positives = 38/80 (47%)
Frame = +2
Query: 419 DYVPRHFVPLLDTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVK 598
D+ R P L P+ ++L + R D + +++ + ++ H + T + Y+ +
Sbjct: 116 DHPLRRLNPHLCVPSLEVLYTLGR--DALLDMLPSPRLLSTHMPLSLLPPSTCKIVYIYR 173
Query: 599 WQKMTLRDAYHYLKIRRPQI 658
QK T +H++K R P +
Sbjct: 174 DQKDTAVSLWHFMKRRHPDL 193
>03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009
Length = 768
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 586 SQTECH*SGHSGDAMNQHHPSVCDHLINKVSNPIHIGEHI 467
S +C GHS +HH D ++ V++P+H H+
Sbjct: 417 SPRQCDRGGHSRHGGRRHHAGATD--VDNVTDPVHPEPHL 454
>02_05_0352 + 28240913-28241362
Length = 149
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 273 SSLINFCVSTTTVGSFSRPTLATLSPTVKT 184
S L C + T++ SRPT+AT S VKT
Sbjct: 69 SILARTCSTWTSLSRTSRPTMATTSGVVKT 98
>08_01_0029 -
216526-216621,216706-216854,217489-217594,218650-218841
Length = 180
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 500 LINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWQKMTLR 619
L VV +G ++L+ + V+ VTLCL +V+W++ LR
Sbjct: 131 LFISVVWSGPLLLITILILVNTLVTLCL-LMVRWKRAELR 169
>04_04_1085 -
30719921-30719960,30720206-30720351,30720469-30720546,
30720649-30720715,30720948-30721090,30721504-30721535,
30721769-30722168,30722540-30722601,30722716-30722892,
30723078-30723201,30723590-30723760
Length = 479
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 428 PRHFVPLLDTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAG 556
P FV +LD D+ ++VADL+ + G L C+ G
Sbjct: 389 PEDFVVVLDENGKDVTS--EQVADLVGDAGNTGSSRLTFCIGG 429
>01_06_1449 - 37444769-37446190
Length = 473
Score = 27.9 bits (59), Expect = 8.1
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 419 DYVPRHFVPLLDTPNSDMLPYMDRVAD 499
+++P H +D P++D+ PY+ R D
Sbjct: 74 EHLPEHAEATIDLPSNDLRPYLRRAYD 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,513,415
Number of Sequences: 37544
Number of extensions: 380065
Number of successful extensions: 816
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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