Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte1d16
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             26   0.99 
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        25   1.7  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   4.0  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    23   7.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.2  

>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +2

Query: 527  GVVLVHCVAGVSRS---VTLCLAYLVKWQKMTLRDAYHYLKIRRPQIRP 664
            G + VHC AGV R+   +TL +  L + Q   + D +  ++I R Q RP
Sbjct: 1157 GPITVHCSAGVGRTGVFITLSIV-LERMQYEGVLDVFQTVRILRSQ-RP 1203


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 276 NSSLINFCVSTTTVGSFSRPTLATLSPTVKTFIATVIHF 160
           +++LIN  VS  T G         LSP+    IA  ++F
Sbjct: 241 STALINRWVSDVTAGKIRNMLEGPLSPSSSVVIANALYF 279


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 694 FDELLEETRVRSNLWSSYLQVVVGIT*GHLLPFDQ 590
           FDEL + T V   L      VV G+  GHL  +++
Sbjct: 298 FDELKQSTGVSITLADGNETVVKGVGSGHLYYYEE 332


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 255 CVSTTTVGSFSRPTLATLSPTVKT 184
           CV+ T   +  +P LA L  T+KT
Sbjct: 207 CVALTQFENADKPNLAKLVETIKT 230


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +1

Query: 271 RIEQGLSIGRVEGHESSLRVWSSRSTWSRQGFASWID 381
           R  +GL   R+EG + +LR + S + + R G+  W D
Sbjct: 87  RNREGLQFYRMEGSDLTLRHYCSEAIY-RNGY-GWDD 121


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,339
Number of Sequences: 2352
Number of extensions: 15854
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)